Gene Information

Name : ybgA (ETAF_2339)
Accession : YP_005699934.1
Strain : Edwardsiella tarda FL6-60
Genome accession: NC_017309
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2659241 - 2660194 bp
Length : 954 bp
Strand : -
Note : -

DNA sequence :
ATGTCTTCTGCCATTCCCGTCGGGATCAGCGCCTGCCTGCTCGGTCAGACGGTGCGCTTTGACGGCGGTCACCGGCGCTT
TGCCTTCGCCGCCGATACCCTGGCGCCGTTTTTCCACTTCCTGCCGCTGTGCCCCGAGATGGGCATCGGCCTGCCGTCGC
CGCGCCCAGCGCTGCGCCTGATTCGCCACGATGCGTCGTCGTCGGTGGCGCTGGTCAACAGCCGGGATCCGACGCTGGAC
TATACGGCGGCGATGGAGGATTTCGCCGCGCGTCAGCTGCCGCAGCTGCAGTCGCTGTGCGGGTTTATCCTCTGCGCCCG
CTCGCCCAGCTGCGGCATGGAGCGGGTGAAGGTGTATACGTCGCACGAGGCGCGTAAAAACGGAGTGGGATTGTTCGCCG
CCGCCCTGATGACGGTGATGCCCTGGCTGCCGGTCGAGGAGGATGGGCGCCTGAGCGACGGCGCGCTGCGGGAGAACTTT
ATTGCCCGAGTATACGCGCTGCACGAGTTTAACCAACTGTGGCCGTCGGGGCTGAGCCGCGGGGCGCTGGTGGCGTTCCA
CAGCCGCTATAAGCTGCTGTTGCTGGCCCACTCTCAGCCCGCCTACCGCGCGCTGGGGCGGATGGTGGCGGAGATAGGCC
AGTGGCCTTCGACGACGGCGTTTGCCACAGAATACCGTCACCGGCTGATGGCGCTGATGCGACAGCCCGCCTCACGCCGT
AACCATACCAATGTGCTGCAGCACGTACAGGGCTACTTCAGCCCACGCCTCAATCCTGCCCAGCGTGCCGAGCTGAGCCA
GCTGATCCTACAGTATCGCCAGGGGGTACAGCCCCTGCTGGCGCCGCTGACGCTGATCAACCACTACCTGCGGGAGTACC
CGGACGACTACCTGGCGTCGCAGCGCTATTTCTCCCCCTATCCGGACGCTCTGCGTCTGCGCTATGGCCATTAG

Protein sequence :
MSSAIPVGISACLLGQTVRFDGGHRRFAFAADTLAPFFHFLPLCPEMGIGLPSPRPALRLIRHDASSSVALVNSRDPTLD
YTAAMEDFAARQLPQLQSLCGFILCARSPSCGMERVKVYTSHEARKNGVGLFAAALMTVMPWLPVEEDGRLSDGALRENF
IARVYALHEFNQLWPSGLSRGALVAFHSRYKLLLLAHSQPAYRALGRMVAEIGQWPSTTAFATEYRHRLMALMRQPASRR
NHTNVLQHVQGYFSPRLNPAQRAELSQLILQYRQGVQPLLAPLTLINHYLREYPDDYLASQRYFSPYPDALRLRYGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-88 58
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 2e-88 58
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 4e-88 58
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 4e-88 58
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 3e-88 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybgA YP_005699934.1 hypothetical protein VFG0490 Protein 1e-88 58