Gene Information

Name : evpB (ETAF_2200)
Accession : YP_005699797.1
Strain : Edwardsiella tarda FL6-60
Genome accession: NC_017309
Putative virulence/resistance : Virulence
Product : type VI secretion system protein EvpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2506652 - 2508139 bp
Length : 1488 bp
Strand : +
Note : Type VI Secretion System

DNA sequence :
ATGAGCGAACAGAACTTGCCAGAAAGTAGCGCCGCCGAGAGCGCTGCGCTAGAGGGCGGCCTGCTGGATAGCATCATTGC
GGAAACCCGGATGGCACGCAGTGATCTGGAGAAGGCGCGGGCCCGAGATCTGCTGGGGGAATGGGTCAGTGAGGTTCTGT
CGGGCACCGTGACGGTATCCGGTGATGTGCTGGCCAGCATTGAGGCGCGTATCGCCCAGATCGATGCGCTGCTCTCCGCC
CAGCTCTCCGCCATTATGCATGAGCCGGCGTTCCAAAAGCTGGAGGGGTCATGGCGTGGGCTGCATTACCTGGTGCATCA
AAGCGAAACCGGTACCGGCCTGAAAATCCGCATGCTGAACGTCAGCCGAGCCGATCTGATCCGCGACTTTAAGAGCGCCG
CCGAGTTTGATCAGAGCGCGCTGTTCAAGAAAGTCTATGAGGAGGAGTACGGTACCTTTGGCGGCGCCCCCTTTGCGGCC
ATGATCGGGGATTATGAGTTCAGCAACCACCCGGAAGATCTGTTCCTGCTGGAGGAGATCTCACACGTTGCGGCGGCGGC
CCATGCCCCCTTCCTCTCTGCCGCCAGCGCAGGAATGTTCGGCCTGGATAGCCTGACAGAGCTGTCGATCCCCCGGGATC
TGGCCAAGGGCTTTGATACGGTTGAGTATGCCAAGTGGAAATCGCTGCGCCAGTCGGAGGATGCCCGCTATATCGCCCTG
GCCCTACCCCACGTGCTTGGCCGACTGCCTTACGGCGCGACGACGGTGCCGGTCGAGTCATTCAATTTTGAGGAGAATGT
CAGCGGCAAGGAGCATGGCAAATATCTGTGGCTGAATGCCGCCTATGCGCTGGGCACCCGCCTGACTCAGGCCTATGCCA
AATATGGCTGGTGCGCCGCCATCCGGGGTGCCGAAGGGGGAGGCCTGGTGGAGGGACTGCCGGCGCACACCTTTACCACC
GATGATGGCGAAGTCGAGCTCAAGTGCCCCACCGAAGTGGCCATTACCGATCGCCGAGAGAAGGAGCTGGCCGAGCTGGG
ATTTATCGCCCTGACCCACTGTAAGGGGACCGACTATGCCGCCTTCTTTTCGACCCAGTCGGTGCAAAAGCCCAAGGAAT
ATGACAGTGACTCCGCCAATGCCAACGCCAGGATCTCCTGCCAGCTGCAATATATTATGGCCACCTCACGCTTTGCCCAT
TATTTAAAATCGATGGTCCGCGACAAAATCGGCAGCTTTATGAGCCGCAGTGAATGTGAATATTTTCTCAATCAGTGGAT
CAGTAATTATGTGGTCGGCTCGGATGATGCTGGCCAGGATATCAAGGCGAAATATCCATTACGGGAAGCCCGCATTGATG
TCAGTGATATTCCGGGCAAACCGGGTTTCTATAAGGCGGTAGCCTATTTAAAACCCCATTTCCAACTGGAGGGGCTGACC
GCGTCTTTACGTCTGGTCGCCGATCTGCCGCCGCCGGCGCAAGGCTAA

Protein sequence :
MSEQNLPESSAAESAALEGGLLDSIIAETRMARSDLEKARARDLLGEWVSEVLSGTVTVSGDVLASIEARIAQIDALLSA
QLSAIMHEPAFQKLEGSWRGLHYLVHQSETGTGLKIRMLNVSRADLIRDFKSAAEFDQSALFKKVYEEEYGTFGGAPFAA
MIGDYEFSNHPEDLFLLEEISHVAAAAHAPFLSAASAGMFGLDSLTELSIPRDLAKGFDTVEYAKWKSLRQSEDARYIAL
ALPHVLGRLPYGATTVPVESFNFEENVSGKEHGKYLWLNAAYALGTRLTQAYAKYGWCAAIRGAEGGGLVEGLPAHTFTT
DDGEVELKCPTEVAITDRREKELAELGFIALTHCKGTDYAAFFSTQSVQKPKEYDSDSANANARISCQLQYIMATSRFAH
YLKSMVRDKIGSFMSRSECEYFLNQWISNYVVGSDDAGQDIKAKYPLREARIDVSDIPGKPGFYKAVAYLKPHFQLEGLT
ASLRLVADLPPPAQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 4e-87 42
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 6e-87 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
evpB YP_005699797.1 type VI secretion system protein EvpB VFG2070 Protein 5e-115 53
evpB YP_005699797.1 type VI secretion system protein EvpB VFG2475 Protein 2e-93 43
evpB YP_005699797.1 type VI secretion system protein EvpB VFG2093 Protein 3e-91 42