Gene Information

Name : cadB3 (ETAF_1698)
Accession : YP_005699298.1
Strain : Edwardsiella tarda FL6-60
Genome accession: NC_017309
Putative virulence/resistance : Virulence
Product : Lysine/cadaverine antiporter membrane protein CadB3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1944412 - 1945686 bp
Length : 1275 bp
Strand : +
Note : -

DNA sequence :
ATGATGGGCAGCGGTATCGCCCTGCTGCCGGCAAACCTCGCCAAAATTGGTTCCATCTCTATTTTTGGTTGGTTAATTGC
CTTGGTCGGTGCAATGTCGCTGGCCTTTGTCTTCGCTCGTTTGACTACACGCGATCCACAGGTAGGCGGCCCTATCGCCT
ACGCAGGCCGTCTGGGCCCAGCCTTTGGCTTCCAGACCGCCGTGCTCTACTATCATGCGAACTGGATCGGTAACCTGGCC
GACTGCCTGGCCGGGGTCGCCTATCTGTCGGTCTTCTTCCCGATGCTCAACGACCCGATACCCGCGGGCATTGCCAGTAT
CGTCATCATCTGGATCATGGCCTTCATTAATATGATGGGCGGAACCTGGGTGAGCCGCCTGACGACCCTGGGGCTGATCC
TGGTGCTGATCCCGGTGGTCGGTACCGCCATCGCCGGCTGGCACTGGTTTGATCCGGCGCTGTACCACGCCAACTGGAAC
ACCACCCAGAGCAGCAGCGGCAGCGCCGTACTGCACAGCATTCTGATCTGCCTGTGGGCCTTTGTCGGCGTAGAGAGCGC
CGCGGTCAGCTCCGGGCTGGTGAAGAACGCCAAGCGCACAGTGCCGCTGGCCACCATGCTGGGAACCGCACTGGCTGGCC
TGATCTACATTCTGGCGACCCAGGTGATGAGCGGGATGTTCCCAGCGCAGACCATGGCCAACACCGGCGCCCCCTTCGCC
GCCAGCGCCTCGATGATCCTCGGCCCCTGGGCCGCACCGGTGGTCTCGGCCTTCACCGCCTTCGCCTGTCTGGCCGCCCT
GGGATCGTGGATGATGCTGGTGGGCCAGGCCGGGGTACGCGCCGCCCGCGACGGTAACTTCCCGCGGATCTACGGCGAGG
TTGACGCCCACGGCGTGCCGCGTAAAGGGATCGTGCTGTCGGCGCTGAAGATGACCGCCCTGATGGCGCTGATGACCTTC
TTGGCCGCCAGCGGCGCCAAAACCTCCGACATCTTCGGCGATTTGATCGGTATCGCGGTGCTGTTAACCATGCTGCCCTA
CTTCTACTCCTGCATTGCGCTGATCCGCCTGGAGGGCCCCTCCCTGCACCACGTGCTGAGCCTGACGGCCGCCACCCTGG
GCTGCCTGTTCTGCTTTATCGCGTTAAGCGGCGCGGAGTCGGTCAAGCTGGCGCTGACCTTTATCATCAGCCTGAGCATC
CTGATGTTCTACGCCCGCCGCCAGGGCTTTCATGAGAAGGCCTACGCCCGCCTCAACCGGCAGGCGCCGCGCTAA

Protein sequence :
MMGSGIALLPANLAKIGSISIFGWLIALVGAMSLAFVFARLTTRDPQVGGPIAYAGRLGPAFGFQTAVLYYHANWIGNLA
DCLAGVAYLSVFFPMLNDPIPAGIASIVIIWIMAFINMMGGTWVSRLTTLGLILVLIPVVGTAIAGWHWFDPALYHANWN
TTQSSSGSAVLHSILICLWAFVGVESAAVSSGLVKNAKRTVPLATMLGTALAGLIYILATQVMSGMFPAQTMANTGAPFA
ASASMILGPWAAPVVSAFTAFACLAALGSWMMLVGQAGVRAARDGNFPRIYGEVDAHGVPRKGIVLSALKMTALMALMTF
LAASGAKTSDIFGDLIGIAVLLTMLPYFYSCIALIRLEGPSLHHVLSLTAATLGCLFCFIALSGAESVKLALTFIISLSI
LMFYARRQGFHEKAYARLNRQAPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadB AAL67382.1 cadaverine/lysine antiporter Not tested PAI II CFT073 Protein 8e-122 69
cadB NP_756989.1 lysine/cadaverine antiporter Not tested PAI II CFT073 Protein 1e-121 69
unnamed CAD66196.1 putative lysin/cadaverin transporter Virulence PAI III 536 Protein 2e-106 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadB3 YP_005699298.1 Lysine/cadaverine antiporter membrane protein CadB3 VFG1671 Protein 1e-106 63