Gene Information

Name : ETAF_0136 (ETAF_0136)
Accession : YP_005697751.1
Strain : Edwardsiella tarda FL6-60
Genome accession: NC_017309
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 153664 - 154485 bp
Length : 822 bp
Strand : -
Note : -

DNA sequence :
GTGCGGATTCTTTGTCATTTATTCGGTATTCACCGTAGCGTTTATTACGCGCTGGTGAAGCGTCCTGTTAATGTGCAAAG
AATTGAATTACGAAGCCGGGTGAGGGCTTTCCATGCTCTCAGTCGTGGCGCTGCCGGTAGCCGGGCAATCAGCCAGATGT
TGCGCCAGAGTGGTGTTAATGCAGTCCGGTGGCTGGCACGACAACTGATGCGGGAATGCGGGCTGACAAGTCGACAGCCG
GTTAAACATCGCTACCGGGTAAACGAAGACAACAGTCCGCCATTGCCAAACTTACTGAACCGGCAGTTTAACCCCACCGC
ACCAAACCGCGTCTGGTGCGGCGACATCAGCTTTATTCGCCTGCGGGACAGACGGTGTCATCTCGCGCTTGTTGTTGATC
TATATTCACGTCGAATTATCGGTTCAGCCCTTTCATTAACCGCTGATGCTGATCTGGCGTGCAGGGCTTTGCGTAATGCT
CTGGAAACACGATCGCGTGATGGCCGTCTGCTGTTTCATTCAGATCAAGGTGTTCAATATAAAAGCAATAAATACAGAAG
GTTACTCTGGCGTTATGGGGTAATGCAAAGTATGAGTCGCAGAGGGAATTGCCTAGATAATTCGCCGATGGAAAGAGTCT
TTCGCAGCTTTAAAAGTGAATGGCTTCCGAAAGGTGGCTATGGTGATTTTAGCCATGCAGTACGCGATATAAACCAGTGG
ATAAATGGTTATTACAACGTTTATCGACCTCATACAAACAATGGTGGTTTATCGCCTTGCTTGCATGAAGAAAAGTGGAA
ACAGGTTATTACAGTGTCCTGA

Protein sequence :
MRILCHLFGIHRSVYYALVKRPVNVQRIELRSRVRAFHALSRGAAGSRAISQMLRQSGVNAVRWLARQLMRECGLTSRQP
VKHRYRVNEDNSPPLPNLLNRQFNPTAPNRVWCGDISFIRLRDRRCHLALVVDLYSRRIIGSALSLTADADLACRALRNA
LETRSRDGRLLFHSDQGVQYKSNKYRRLLWRYGVMQSMSRRGNCLDNSPMERVFRSFKSEWLPKGGYGDFSHAVRDINQW
INGYYNVYRPHTNNGGLSPCLHEEKWKQVITVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43898.1 putative transposase Not tested LEE Protein 7e-44 53
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 7e-44 53
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 5e-44 53
Z5089 NP_290241.1 transposase Not tested LEE Protein 7e-44 53
unnamed AAC31485.1 L0006 Not tested LEE Protein 4e-42 53
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 5e-42 53
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 3e-47 53
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 8e-46 50
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 8e-46 50
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 2e-44 49
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 4e-53 48
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 4e-53 48
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 4e-53 48
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 4e-53 48
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 4e-53 48
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 6e-53 48
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 4e-53 48
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 6e-53 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAF_0136 YP_005697751.1 hypothetical protein VFG0785 Protein 3e-44 53
ETAF_0136 YP_005697751.1 hypothetical protein VFG1484 Protein 4e-46 50
ETAF_0136 YP_005697751.1 hypothetical protein VFG1122 Protein 2e-53 48