Gene Information

Name : oppD2 (Cp106_0746)
Accession : YP_005696347.1
Strain : Corynebacterium pseudotuberculosis 1/06-A
Genome accession: NC_017308
Putative virulence/resistance : Unknown
Product : Oligopeptide transport ATP-binding protein OppD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 784884 - 786560 bp
Length : 1677 bp
Strand : +
Note : -

DNA sequence :
ATGAGTGAAAATAATAATGCGCCGCTTCTAGAGGTAAAAGACCTACAAATTTCCTTTACCTCATCAACTGGCACCGTCGA
TGCCGTCCGTGGTGTTAACTTGACCATTTATCCAGGCCAGTCGGTGGCCATTGTGGGGGAATCTGGCTCAGGCAAGTCCA
CCACTGCAATGGCGATCATCGGACTGCTACCCGGAACCGGAAAAGTGACGGGTGGTCAGATCTTGTTTGACGGAAAAGAC
ATCACAAAGCTTTCTGATAAACAGATGCAATCCTACCGAGGCTCGCAGATCGGACTTGTGCCTCAAGATCCCATGAGCAA
TCTCAATCCTGTGTGGCGTATTGGCACACAGGTAAAGGAATCGCTCAAAGCAAATAATGTGGTCCCGGGGTCTGAAATGG
ATGCTCGCGTCGCAGAGCTATTGGAGGAAGCAGGGCTTCCCGACGCCCACCGCCGCGCGAAGCAGTATCCGCACGAATTT
TCCGGAGGCATGCGTCAGCGAGCCCTTATCGGCATTGGTTTGGCTGCACGTCCGAAGCTGCTCATCGCCGACGAACCCAC
CTCCGCCCTGGACGTGACTGTACAAAAACGCATCTTGGATCATTTGGGTGGGCTCACACAGGATTTGGGAACTGCAGTTC
TCTTTATCACGCATGATCTTGGCCTGGCAGCTGAGCGTGCTGAGCACCTTGTGGTCATGCATCGTGGTCGCGTTGTCGAA
TCCGGCCCTAGCCTTCAGATTCTCCGCGACCCTCAGCATCCGTACACCAAACGGTTGGTTCACGCTGCCCCTTCTCTGGC
TTCTGCTCGGATTCAATCAGCTCAGGAGCACGGAGTGGAAAGCTCCGAGCTATTGGCTTCTGAAAAGACGGATAGCCAGG
AGATCATCAGGGTAGAAAATCTCACCAAGATTTTCGACGTTCGTGGTCAGCGCGGGAAAAAGGCCGAGCTACGTGCGGTC
GACGACGTCAGCTTCTCGCTCAAACAGGGAACGACTCTCGCGTTAGTAGGAGAGTCGGGGTCCGGTAAGTCAACTGTGGC
TAATATGGTCCTCAACCTTATCGACCCAACTTCAGGCAAGGTCTACTACAAGGGCACGGACCTATCCACGCTAGGAAAGA
AAGAACTCTTTGCGATGCGGCGCAAGCTGCAAGTGGTGTTCCAAAACCCTTATGGTTCTTTAGACCCAACATATTCAATT
TTCCGATGCATCGAAGAGCCACTTGTTGTGCATCAAGTGGGAAACCGCAAAGAACGCGAGAAGCGTGTGGCCGAACTCCT
AGATATGGTGGCCATGCCGCGTTCGGCCATGCGTCGTTATCCGAACGAACTCTCCGGAGGGCAGCGCCAACGTATCGCTG
TAGCTCGTGCGTTAGCGCTAAACCCTGAGATTATTGTTCTGGACGAGGCCGTCTCCGCCTTAGATGTTCTGGTTCAGAAC
CAGATTTTGCAGCTTTTGGCTAATCTTCAGTCCGAGCTCAATCTGAGTTATCTGTTTATTACTCATGACTTAGCGGTGGT
GCGCCAAACAGCGGATGAAGTTGTAGTTATGCAGAAGGGACGTGTGGTGGAACAAGGAACTACTGATGCCCTCTTCCTAG
CGGCTAAGGAAGAATACACGCGTAACCTCATTGATTCTGTTCCAGGTCTGGGAGTAGAACTCGGTACCGGAATGTAG

Protein sequence :
MSENNNAPLLEVKDLQISFTSSTGTVDAVRGVNLTIYPGQSVAIVGESGSGKSTTAMAIIGLLPGTGKVTGGQILFDGKD
ITKLSDKQMQSYRGSQIGLVPQDPMSNLNPVWRIGTQVKESLKANNVVPGSEMDARVAELLEEAGLPDAHRRAKQYPHEF
SGGMRQRALIGIGLAARPKLLIADEPTSALDVTVQKRILDHLGGLTQDLGTAVLFITHDLGLAAERAEHLVVMHRGRVVE
SGPSLQILRDPQHPYTKRLVHAAPSLASARIQSAQEHGVESSELLASEKTDSQEIIRVENLTKIFDVRGQRGKKAELRAV
DDVSFSLKQGTTLALVGESGSGKSTVANMVLNLIDPTSGKVYYKGTDLSTLGKKELFAMRRKLQVVFQNPYGSLDPTYSI
FRCIEEPLVVHQVGNRKEREKRVAELLDMVAMPRSAMRRYPNELSGGQRQRIAVARALALNPEIIVLDEAVSALDVLVQN
QILQLLANLQSELNLSYLFITHDLAVVRQTADEVVVMQKGRVVEQGTTDALFLAAKEEYTRNLIDSVPGLGVELGTGM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 0.0 89