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Name : lysS1 (Cp106_1883) Accession : YP_005697441.1 Strain : Corynebacterium pseudotuberculosis 1/06-A Genome accession: NC_017308 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 2060072 - 2063323 bp Length : 3252 bp Strand : + Note : - DNA sequence : ATGTTGCATATTATCGATTGCATGCAGAAACGCTGGGAAACCCGAGTAATCCTCTTTACAGCACAGTTAGCCACTATCTG GCTGATTATTGGACTGATACTAAAACATATAAACATTAATCTCATTAGGGATATTAGTTTTGGTTTTTCCTTAATCGGCC TCCCCAACTTCCCCACTCTATTTATCACCATCCTCATGGTGTTGCTCACATCGGGGATGCTGCGCGGACACCGAGGGGCG TTGCTGTTTTATCTTCTGGGATTCCAGGTGCCGGATCTGCTTTCTGGCATCTTGTTCTTCGTCTTGGGTCTCTTCAACGA TCCCGAGATTACCGGTGATAATGCCAAGTACACGATTATCGCGTTCGCAGTTTCCACGCTGTTTTCTCTGTTCTATCTTG TTTGCGGATACCGCGCGCTTAAAGACTTCCCAGCTCGCGTTGTTGGTTCCTGGGTGCGGGCTCTCAGCACGCTCATCGTT GGCCTCATTATCTCGTTTGTTGTGATGTGGGGTGTGCTGGTCTTGCAGGAGCATCAAGACAGCAGCATAGCGGCAGCCTG GTCTTTCTTCACTGCCATCGGCCTCAGCCCTTCAGAACCGCCTTTCCCAACTGAGCTGCATAACCCGCACTTTATCCGGG TTATCGGTGGCATCCTTTCCTCCGTGGCGCTCTTTGCCGCCATCGCTATTCTCTTTGGTTCGCGCAAGCATGATGCAGCA ACGGCTGAGGAACAGCTTCTTACGCGTAAGTTACTGCTTAATCCCCCGTCGCCGGATTCACTCGCTTATTTTTCCACTCG CTATGACCGCAGCTTGATCACCTCCCCGGATGAAAAGGCTGCCGTGTCCTTCCGCGTTGTCGACGGTGTATGCCTTGCCG CTGGTGACCCCCTCGGCGATCCAGAATCCTGGCCTGCGGCTGTGGAAAACTGGCGTGAGCATAGCCGTAAGAACGGTTGG GTTCTCGGTGCTGCTTCTGTCTCAGAAGCTGGCGCGAAAGCTTATGCTGCTGCAGGCATGAGCGTGATTACGCTTGGTGA TGAGGCAGTAGTAGACGCAGAGAACTTCCATCTCAAGAATATGCCGGAGGTTCGCAAGGAGATAGCCGGACCGCGTAAAG CTGGCTATACCGTCCGGGTGCAGCGTCAGTCGCAGATCCCCGCTGAAGAGCTTCAGCATCTCTCCCAGCTCGCTGAAGCT TGGCGACGCGGCGACGAACGCGGATTCACCATGGCGTCTGGCCGCATCGGCGATCCCCGTGACTCGCGTACTGTCATAGT AACCGCCCACGATGCTGACGATAACGTCATGGGCCTGCTCTCCTTTGTTCCGTGGGGACGCCGTGGGCTTTCCCTTGACG TTATGCGCCGTAATCCTGATGCCGTCGGCGGTGTCACAGAGTTTATGGTGGTTGGTCTGGCGCAGGAAGCCGGCAACCTT GGAATATCCAAGTTTTCCCTAAACTTTGTTACCTTCCGCGAAGCTCTCGATCGCGGTACCTATGTAGCGGCTTCCCTGAG GGAGCGGCTGCTGCTCAAACTGCTTCTCCTGTCTTCTCGCTGGTGGCAGATCCAATCGTTGTACCAATCCAACGTCAAGT ATCATCCGCAATGGCAGTCGCGCTTCCTATGCATTGATCATGGATTCCACACGGCCCGCGTCCTTATTGCTTTTGCTAGC GCCGAGGGTTTCTTGCCTTGGATGAAGGAATATGGGTCTCCTGTGGGCGATCCTCAGGAGATCGCCGCACTTGAATCCGC GGCTCTTATGCCGGCTATCGAGCCGCCAGCTTTATCGGTCCAAGAGCGCATGCGCAAGACAAAGCTGGAGGAGCTTGAGT CGCTCAGCATGAGCCCCTACCCGCCGGCTGTGCCTCGGACTACTTCTATTAAAGAATTACTCGTAGCAGATGCGACCCAC ACCGTTTCAGAAACACCGATCTCAGTCACCGGTAGAGTCGCTTTTATCCGTGATCATGGCGGAGTGGTCTTTGCGGATTT GGTTGAGGAGCACACAAAGCTCCAGCTAGTGATTGAGCGCAGTGCAGGACAGACGATGACCTTGTTTAAGCACTTGGTCA GCCGCGGTGACCTCATTTCTGCCACAGGTCAGTTGGGGGAGTCTCGCAACGGTACTCGTTCCCTCATTGTCTCTTCCTGG GATATGGCCGCTAAATCGCTTACGCCGATGCCTCGCGTCCCGCTCAGCAACCCGCACTTGCGGGCAAAGTTCCGCCACAT GGACTTTGCGCTTAATAAAAAAGCTACGGATATCTTCCTTGCCCGTTCCAAGGCCGTCAGCGCAGTACGCTCCGTGCTGC AAGAGCAGGGCTATATGGAAGCCGAAACCCCCATTCTGCAGACCATCCATGGTGGTGCAAATGCTCGCCCCTTCAGGACT CATATCCGAGCATACGATCAAAACCTCACGCTCAGGATCGCGCCCGAGCTGTACCTCAAGCGCCTGGTGGTCGGCGGCAT CCCTCGTGTCTTTGAGATAGGAAGGAACTTCCGTAACGAGGGCGTGGATTCCACCCACAACCCCGAGTTCACGTCGCTGG AGGCCTACCAGTCTTATGGCAACTGGGACACCATGCGGGTGCTTACAGAAGAGCTGATTCGTTCCGCAGCAATCGCCGTC TACGGGAAGCCAGAGGTGACTACGGCGGACGGACAGGTTCTTGATCTCACCGGATCCTGGCCTGTTGTTCCTGTGTATGA TGCGGTGTCTGAGGCCGTCGGCAAGCATATCTCCCCAAACGCAGATGTTTCCGAATATGCAGACATCGCGGAGAAATACG GCATCACCGCCGCCACCGTGGGTGATCTGGTCAACGAGCTTTACGACGAACTCATCGAACCCAACACCGTCTTCCCCACC TTCTACGCTGGATTCCCGGTGGAGACTTCGCCACTCACAATGGCAGACCCAGATCAGCCGCGCATCGCCCAGCGTTGGGA CCTTGTAGCCTGCGGGATGGAGCTAGGCACCGCCTACACAGAGCTCGCGGACCCGCTGGAACAATACGCTCGTCTTTCCG ATCAGTCTCTACGCGCCGCTGGCGGCGACGCCGAGGCAATGGAATTGGATGAGAACTTCCTCAAGGCGCTGCAGTTTGGC ATGCCGCCCACAGGCGGCCTAGGAATCGGAATTGATCGCTTGGTCATGTTCCTTACCGGCCAAAACATCCGCGAAGTTCT CTCCTTCCCCTTTGTCAGACCAGATACGGACGGATCAGCTCGGGGTTGTTAA Protein sequence : MLHIIDCMQKRWETRVILFTAQLATIWLIIGLILKHININLIRDISFGFSLIGLPNFPTLFITILMVLLTSGMLRGHRGA LLFYLLGFQVPDLLSGILFFVLGLFNDPEITGDNAKYTIIAFAVSTLFSLFYLVCGYRALKDFPARVVGSWVRALSTLIV GLIISFVVMWGVLVLQEHQDSSIAAAWSFFTAIGLSPSEPPFPTELHNPHFIRVIGGILSSVALFAAIAILFGSRKHDAA TAEEQLLTRKLLLNPPSPDSLAYFSTRYDRSLITSPDEKAAVSFRVVDGVCLAAGDPLGDPESWPAAVENWREHSRKNGW VLGAASVSEAGAKAYAAAGMSVITLGDEAVVDAENFHLKNMPEVRKEIAGPRKAGYTVRVQRQSQIPAEELQHLSQLAEA WRRGDERGFTMASGRIGDPRDSRTVIVTAHDADDNVMGLLSFVPWGRRGLSLDVMRRNPDAVGGVTEFMVVGLAQEAGNL GISKFSLNFVTFREALDRGTYVAASLRERLLLKLLLLSSRWWQIQSLYQSNVKYHPQWQSRFLCIDHGFHTARVLIAFAS AEGFLPWMKEYGSPVGDPQEIAALESAALMPAIEPPALSVQERMRKTKLEELESLSMSPYPPAVPRTTSIKELLVADATH TVSETPISVTGRVAFIRDHGGVVFADLVEEHTKLQLVIERSAGQTMTLFKHLVSRGDLISATGQLGESRNGTRSLIVSSW DMAAKSLTPMPRVPLSNPHLRAKFRHMDFALNKKATDIFLARSKAVSAVRSVLQEQGYMEAETPILQTIHGGANARPFRT HIRAYDQNLTLRIAPELYLKRLVVGGIPRVFEIGRNFRNEGVDSTHNPEFTSLEAYQSYGNWDTMRVLTEELIRSAAIAV YGKPEVTTADGQVLDLTGSWPVVPVYDAVSEAVGKHISPNADVSEYADIAEKYGITAATVGDLVNELYDELIEPNTVFPT FYAGFPVETSPLTMADPDQPRIAQRWDLVACGMELGTAYTELADPLEQYARLSDQSLRAAGGDAEAMELDENFLKALQFG MPPTGGLGIGIDRLVMFLTGQNIREVLSFPFVRPDTDGSARGC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
