Gene Information

Name : ureC (Cp106_1876)
Accession : YP_005697434.1
Strain : Corynebacterium pseudotuberculosis 1/06-A
Genome accession: NC_017308
Putative virulence/resistance : Virulence
Product : Urease alpha subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2052702 - 2054411 bp
Length : 1710 bp
Strand : -
Note : -

DNA sequence :
ATGTCTTTTGAAATGAGTCGGCGTCAGTATGCAGAGCTGAATGGCCCGACCACCGGCGACGGAATCCGTTTGGCTGATAC
AGAGCTCATTGCCGTTGTTGAAAAGGATCTTACTCAGTACGGCGACGAGGTCTCCTTCGGCGGCGGAAAAGTTATCCGTG
ACGGCATGGGTCAAAACTCGCGCGTCGAGGCAGATCAGGTCCCAGACCTGGTTATCACGAACACCATTATCGTGGACTAC
ACCGGTATTTACTCTGCTGATATTGCTGTGAAAGACGGCAAGATCATGAAGATCGGTAAAGCGGGTAACCCCGATATTAT
GGACAACATCGACATCATCGTCGGTGTGGGTACGGAAGTTATTGGTGGCGAAGGCAAGATTGTCACTGCTGGCGCTATTG
ATACGCACATCCACTTTATTTCCCCGGAACAGGTGGAAGCTGCGCTGGACAACGGTACAACCACCCTTATCGGTGGCGGA
ACTGGCCCGGTTGATTCCACCAACGCTACTACCGTTACCGCAGGTGCTGCCAACATCACCAAGATGATTGAGGCTTCCCG
CGACTTCTCCGTGAACGTCGGTTTCTTGGGTAAGGGACACGCCTCCAACCCTGAGCGTCTGCGTGAGCAGATTCGAGCAG
GCGCTATCGGCCTGAAGATTCACGAGGACTGGGGTGCTACCGCTAACACCATCGACAACGCACTGACTGTTGCGGATGAG
ATGGACGTTCAGGTTGCTATCCACACCGATACCCTCAACGAGGGCGGTTTCGCGGACAACACTATTGCGGCTTTCAAAGA
TCGCGTTATCCACACCTTCCACACCGAAGGCGCTGGCGGCGGACATGCCCCGGATATTCTGAAGGTAGCTGGTCTGCCTA
ACGTTCTTCCTGCATCCACCAACCCAACGCTTCCGTTTACCGTGAACACGATGGATGAGCACCTTGACATGATCATGGTG
TGCCACCATCTCAATGCTGATCTTCCCGAGGATATTGCGTTTGCTGATTCGCGTATTCGTAAGGAAACCATTGCGGCAGA
AGATGTTCTGCACGATATGGGCGTCTTGGCAATCACTTCTTCTGACTCCCAAGCAATGGGCCGAGTTGGCGAGGTTGTCC
TGCGCACATGGCAGGTTGCTCACCGCATGAAGCAGCAGCGTGGCCCGCTTGAGGGCGATACCGTTAACAACGACAACGAG
CGCATTAAGCGTTACATCGCTAAGTACACCATCAACCCGGCTATTGCCGCTGGCGTCGCAGATACCATTGGTTCTGTTGA
AGAAGGAAAGCTGGCTGACTTGGTTGTTTGGGACCCTGCTTACTTTGGCGTGAAGCCAAGCATCGTGCTCAAGTCCGGTA
TCATCGCGCGCTCCATCATGGGTGATGCCAATGCCTCGATCCCGACTCCACAGCCACGTACTATGCGCTACTCCTTTGGC
GCTCGCGGCGCAGCTGCTGGTCGTACCTCTGTTACCTTCCTTCCCACAGCAGCTTTTGAGGCTGGCATACCTGAGAAGCT
GGGGATTGATCGTAAGTTTGTTGAGGCAAAGAACATGCGCGAGATCTCTAAAGCTGATCTGAAGTACAACAACGCAACGC
CAGATATCAAGGTTGATCCAGAGACCTATGAGCTGACGGTTGATGGAAAGAAGGTTACTTCTGAGGCTGCTACAGAACTG
CCGATGACTCAGCGTTACTTCCTGTTCTAG

Protein sequence :
MSFEMSRRQYAELNGPTTGDGIRLADTELIAVVEKDLTQYGDEVSFGGGKVIRDGMGQNSRVEADQVPDLVITNTIIVDY
TGIYSADIAVKDGKIMKIGKAGNPDIMDNIDIIVGVGTEVIGGEGKIVTAGAIDTHIHFISPEQVEAALDNGTTTLIGGG
TGPVDSTNATTVTAGAANITKMIEASRDFSVNVGFLGKGHASNPERLREQIRAGAIGLKIHEDWGATANTIDNALTVADE
MDVQVAIHTDTLNEGGFADNTIAAFKDRVIHTFHTEGAGGGHAPDILKVAGLPNVLPASTNPTLPFTVNTMDEHLDMIMV
CHHLNADLPEDIAFADSRIRKETIAAEDVLHDMGVLAITSSDSQAMGRVGEVVLRTWQVAHRMKQQRGPLEGDTVNNDNE
RIKRYIAKYTINPAIAAGVADTIGSVEEGKLADLVVWDPAYFGVKPSIVLKSGIIARSIMGDANASIPTPQPRTMRYSFG
ARGAAAGRTSVTFLPTAAFEAGIPEKLGIDRKFVEAKNMREISKADLKYNNATPDIKVDPETYELTVDGKKVTSEAATEL
PMTQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 0.0 100
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 0.0 100
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 0.0 100
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 0.0 100
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 3e-160 63
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 3e-160 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ureC YP_005697434.1 Urease alpha subunit VFG0270 Protein 1e-141 59