Gene Information

Name : potD (Cp106_0180)
Accession : YP_005695813.1
Strain : Corynebacterium pseudotuberculosis 1/06-A
Genome accession: NC_017308
Putative virulence/resistance : Unknown
Product : Spermidine/putrescine-binding periplasmic protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 186627 - 187628 bp
Length : 1002 bp
Strand : -
Note : -

DNA sequence :
GTGTTATCTAGATGGCTGCGATTGCTTGCTGTCTGCGTTGTGGCGATAGTGTCAGCGGTTACGGTGTATCGGACTTTGTT
TCCTACAAAAACTGCTGTGACTATCATGTGCTCGAATGATGTAACAGTATGTGAGCAGTGGAAGCATGATATTGCCCATG
AGCTGGGACTGAAGGTTCGTTACGTTAGTCTGCCCACCCAGGAAGCATTGAAGCGGCTGCAGACGGGGTCTCATGGATTT
GATGTCTGGGTTGGGGGTCCCTCGGAGAATTATCGCCTGGCTGCCCAGTTGGGTCTATTGCAGGCAGCGGATTTACCAGC
GGCGGACGCTATTCCGGCGCAGTTTAAAGACCCACAAAATCGGTGGTTTGGGGTGTATGCGTCGGTGTTGAGTGTGTGCA
GTGATCGTGATGCCTTGAACCGCTTAGGGGTTCCAGTTCCGCGTTCGTGGGCAGACGTGATGCGCCCTGAGCTACGCGGT
TGGGTATCGGCACCGTCACCAGTGTCCTCTGGAACTGGATATGCGATGTTGTTGAGCATGCAGGCAGCCGGATTGTCTCA
AGAACAGATTGCCAGGATTGTGGATAATGTAGATCGTTTTACACGGTCAGGTAATGCGCCTAGTGACGTGGTAGCGCACG
GTGAAGCTGCAGTGGCGATTTCTTATGAGCCGTATTGTCAAAATAAGACCACGCGTTTGGGACGGGATATGGAGATATCT
TATCCTGCAGAAGGAACGTCATTTGAGATTGCCTCTGGTGGCGTAGTGGTGCAGAGACATACTAAGTCGGCGGCGTATGA
GGTGATGAATTGGTTGTTATCGCCGTCGGGCCAAACGTCTGCTCTAAGAGCGGGATTGCCGCAGATACCTACAAACAATT
TGGTTGCAAACAATATTTCTACGCGATTGAAAGACTCACACGGCATTGTTGCAGTCGATCCAACGGTTGCCGATTCTGAG
CGTGAACAGTGGATGAGCTGGTTTTCGGAGCGGCGCATATGA

Protein sequence :
MLSRWLRLLAVCVVAIVSAVTVYRTLFPTKTAVTIMCSNDVTVCEQWKHDIAHELGLKVRYVSLPTQEALKRLQTGSHGF
DVWVGGPSENYRLAAQLGLLQAADLPAADAIPAQFKDPQNRWFGVYASVLSVCSDRDALNRLGVPVPRSWADVMRPELRG
WVSAPSPVSSGTGYAMLLSMQAAGLSQEQIARIVDNVDRFTRSGNAPSDVVAHGEAAVAISYEPYCQNKTTRLGRDMEIS
YPAEGTSFEIASGGVVVQRHTKSAAYEVMNWLLSPSGQTSALRAGLPQIPTNNLVANNISTRLKDSHGIVAVDPTVADSE
REQWMSWFSERRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
potD YP_005680457.1 Spermidine/putrescine-binding periplasmic protein Not tested PiCp 3 Protein 8e-135 99
potD YP_005682548.1 Spermidine/putrescine-binding periplasmic protein Not tested PiCp 3 Protein 8e-135 99
cpfrc_00181 YP_003782581.1 hypothetical protein Not tested PiCp 3 Protein 8e-135 99
CDB402_0207 YP_005126720.1 ABC transporter substrate-binding protein Not tested Not named Protein 6e-122 88