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Name : clpB (Cp106_1832) Accession : YP_005697398.1 Strain : Corynebacterium pseudotuberculosis 1/06-A Genome accession: NC_017308 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone protein ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 1996456 - 1998969 bp Length : 2514 bp Strand : - Note : - DNA sequence : ATGAATTCATTTAACCCAACAACTAAAACTCAGGAGGCCTTGCAGGTTGCGCTGCAGCAGGCGTCTTCCTTAGGAAACCC AGATATTCGGCCAGCGCATTTACTTGCGGCGATCTTAGGCCAGGAGGACGGCATCGCCGTGCCCGTCTTGCGCGCTACGG GCGTAGACCCACAGGTGGTGGCCAAGGAGGCCAATGCACTTGTAGCGGGGTATCCCAAGGCTGAGGGGTCTGGCATGGCC AACCCCAACTTTAACCGCGATGCTCTCAACGCTCTGACCGCTGCGCAAGAGCTGGCTGGTGAATTAGGTGATGAGTACGT ATCTACTGAGGTGCTACTCGCCGCGATTGCTCGGGGTAAGTCCGATGCTGCGGAGTTACTGACCAAGCGAGGCGCTACGT ATGACGTGATTAAGGGAGTGTTCCCCTCTGTGCGAGGAAGCAAGAAGGTGACTAGTCAGGATCCGGAAGGCCAGTTCCAA GCTCTGGAGAAGTATTCCACCGACCTTACGGCTCGTGCTCGTGAGGGAAAGATTGATCCCGTTATCGGGCGTGACTCGGA GATTCGGCGTGTGGTTCAGGTACTCAGCCGCCGCACTAAGAATAACCCCGTTCTTATTGGTGAGCCTGGCGTGGGTAAGA CCGCGATCGTAGAAGGCCTGGCTCGCAGGATTGTTGCCGGCGATGTTCCGGAATCACTGAAGGGGAAGACCCTTATCAGC CTTGATCTTGGATCGATGGTCGCTGGCGCCAAGTACCGTGGCGAGTTTGAGGAACGCCTCAAGGCTGTGCTTGATGAGAT CAAGTCGGCAGAGGGCGAGATCATTACTTTTATTGATGAGCTGCACACCATTGTTGGTGCAGGCGCTACGGGCGATTCCG CTATGGACGCCGGCAATATGATCAAGCCACTGCTAGCGCGTGGCGAGCTACGCCTAGTGGGTGCCACTACTCTGGATGAA TACCGCAAGTACATCGAGAAAGATGCGGCCTTGGAACGCCGTTTCCAGCAAGTCTTTGTGGGCGAACCCTCTGTAGAAGA CGCTATCGGTATTCTGCGCGGTCTTAAAGAGCGCTACGAGGTGCATCATGGTGTGCGTATTCAGGATTCCGCATTGGTTG CCGCTGCTACTCTCTCGGATCGCTATATCACGTCTCGCTTCCTGCCGGACAAAGCAATTGACCTGGTCGATGAGGCCGCG AGCCGCCTGCGCATGGAGATCGATTCTTCCCCGCAAGAGATCGATGAGCTAGAGCGTGTTGTGCGTCGCCTGGAGATTGA AGAAGTCGCACTGAGCAAGGAGACGGATGCGGCCTCTCAGCAGCGCCTGGAGAAGTTGCGCCAGGAGCTTGCCGACGAGC GCGAGAAACTCGGCGAGCTCAAAGCCCGCTGGAATAATGAGAAGTCTGCAATAGATAAGGTGCGCGAGGCCAAGGAAGAG CTAGAGCATCTGCGTTCTGAGTCCGAGATCGCTGAGCGCGAAGGCGACTACGGCAAGGTGGCGGAGCTGCGCTATGGCCG AATCCCAGAGTTGGAAAAGCAGGTGGCTGAGGCTGAGGCCCATACAACTGAGACCACTATGCTTTCGGAGGAGGTAACAC CGGACACCATCGCTGATGTGGTTTCTGCTTGGACTGGTATCCCCGCGGGCAAGATGTTGCAGGGGGAGACGGAAAAGCTT CTGCGCATGGAATCTGAGCTGGGTAGCCGAGTGGTTGGGCAGCTAGAAGCCGTTGAGGCTGTGTCTGATGCTGTGCGCCG TGCGCGCGCTGGAGTAGCTGACCCGAACCGCCCGACTGGTTCCTTCCTTTTCCTTGGGCCTACGGGCGTGGGTAAGACTG AGCTGGCTAAAGCTTTGGCCGAGTTCATGTTTGATGACGAGCGCGCGATGGTGCGCATAGATATGTCTGAGTACGGGGAG AAGCATTCCGTGGCTCGACTTGTTGGTGCCCCTCCCGGATACGTTGGTTATGATCAAGGCGGTCAGCTCACCGAGGCTGT GCGGCGGCGTCCCTACACGGTGGTGCTTTTTGACGAGGTAGAGAAAGCACATTCCGATGTCTTTGACATTCTGCTGCAGG TACTCGATGAAGGCAGGCTTACCGACGGCCAAGGTCGTACCGTTGATTTCCGGAACACCGTGCTCATCCTCACCTCCAAC CTGGGGGCCGGCGGTACTCGCGAGCAAATGATGGATGCCGTCAAGCGAGCATTCAAACCGGAATTTGTTAACCGCCTGGA TGATGTGGTGATCTTTGATCCGCTCTCAGAGGAACAGCTCACTCATATTGTGGAGATCCAGATTGCTCAGCTGGCAAACC GACTTTCGGCGCGTCGCCTGACCTTGCAGGTCTCGGATGCTGCAAAGTTGTGGTTGGCTGAACGCGGTTACGAGCCCGCC TATGGCGCGCGTCCGCTGCGTCGTCTGATCCAACAGGCGATTGGCGATCAGCTGGCCAAGAAGTTGCTGGCAGGCGAGAT CCGCGACGGCGACACCGTGCACGTTTTTTACTAG Protein sequence : MNSFNPTTKTQEALQVALQQASSLGNPDIRPAHLLAAILGQEDGIAVPVLRATGVDPQVVAKEANALVAGYPKAEGSGMA NPNFNRDALNALTAAQELAGELGDEYVSTEVLLAAIARGKSDAAELLTKRGATYDVIKGVFPSVRGSKKVTSQDPEGQFQ ALEKYSTDLTARAREGKIDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLIS LDLGSMVAGAKYRGEFEERLKAVLDEIKSAEGEIITFIDELHTIVGAGATGDSAMDAGNMIKPLLARGELRLVGATTLDE YRKYIEKDAALERRFQQVFVGEPSVEDAIGILRGLKERYEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAA SRLRMEIDSSPQEIDELERVVRRLEIEEVALSKETDAASQQRLEKLRQELADEREKLGELKARWNNEKSAIDKVREAKEE LEHLRSESEIAEREGDYGKVAELRYGRIPELEKQVAEAEAHTTETTMLSEEVTPDTIADVVSAWTGIPAGKMLQGETEKL LRMESELGSRVVGQLEAVEAVSDAVRRARAGVADPNRPTGSFLFLGPTGVGKTELAKALAEFMFDDERAMVRIDMSEYGE KHSVARLVGAPPGYVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHSDVFDILLQVLDEGRLTDGQGRTVDFRNTVLILTSN LGAGGTREQMMDAVKRAFKPEFVNRLDDVVIFDPLSEEQLTHIVEIQIAQLANRLSARRLTLQVSDAAKLWLAERGYEPA YGARPLRRLIQQAIGDQLAKKLLAGEIRDGDTVHVFY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-96 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 4e-98 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-98 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_005697398.1 | ATP-dependent chaperone protein ClpB | VFG2084 | Protein | 4e-106 | 44 |
| clpB | YP_005697398.1 | ATP-dependent chaperone protein ClpB | VFG2076 | Protein | 1e-108 | 41 |
