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Name : gabD (CpCIP5297_0651) Accession : YP_005694220.1 Strain : Corynebacterium pseudotuberculosis CIP 52.97 Genome accession: NC_017307 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 670720 - 672207 bp Length : 1488 bp Strand : + Note : - DNA sequence : ATGACTGACGGTTCAAAAGAGAACAAGATTATGCAGACGACGCTCCCCGAGGGCGCACCTACGCAGCTCTTTCTCGGCGG CGAGTTCACCGATGGACATGAGGGAGAAACCTTTGAAGTCCTGAATCCTTCCGATGGCAGCATCCTGGCTCGGGTGGCGT CGGCAAGCAAACATGATGCGGAGGAGGCACTGAATAAGGCCGCGAAAGCGCAGCCATTGTGGGCAGCTACTTCGGCGCGC GAGCGCTCAGACGTTCTGTGGAATGCCTACAAATCTCTTCTGGAGAACTCGGAAAAGTTAGCTGTGATTCAATCACTGGA ATTGGGTCGTGCATTGCCTGATTCACGCGCAGAGGTTGCATATGCGGCGGAGTTTTTTCGGTGGTTTGCGGAGGAGGCCG TAAGAATACGGGGAGACTATCGGCATAGTCCCACGGGAAACTCACGATTGATTGTTCATCAACAACCGGTGGGAGTGTCT CTGGCCATCACTCCATGGAATTTCCCCTTAGCTATGGGAACCCGCAAGCTGGGACCAGCGTTGGCCGCCGGATGCACAAT GATCCTCAAACCCGCATCTAAAACTCCTTTGACCATGCTTTATCTGGCGCGCATTCTCAAAGAATCAGGGCTTCCGGAGG GTGTGGTTTCTGTCTTACCCACAGCGGATTCTTCAGTGATTTCTGATCTGCTGGATGATCCACGGTTACGCAAGCTCACT TTCACAGGCTCGACTGAAGTCGGGCAAAAACTTGCGGCACGCGCTGCTCAACATTCCATGAAAGTATCCCTCGAGCTTGG CGGGAATGCGCCGTATATGGTGATGGAAGATGCGGACATATCTGTTGCAGCTCAGGCCGTTGCCACAGCCAAAATGCGCG GGGCCGGGCAGGTATGTATTGCTGCCAACAGGTTCTTGGTTCATGAATCGATTAAAGACGAGTTTTTAGACCGTGTTATT GACACCATGAAATCCTTTACTCAAGGACCCGCAACACAAGAGGGCGTGGATTTTGCTGCTCTTTCTGGTGCAGATCAGCT AGAAAAGGTTACTGAGCTTGTTAACGACGCCCTCGCTCACGGTGCTACTCGGGTTCTGGGAGAATCACTGCCGGCAGGAC TTCCAGAGGGCGGTTTTTATTATCCGGCGACGGTGCTAGACAACGTACCTCTAGATGCTCGTATTGTTCATGAAGAAATA TTTGGTCCCGTGGTTGCTATCTCCACCTTCAGGGATGATGAGGAAGCCATAGCGATGGCTAATAACACTCCCTTCGGATT AGCCGCATATGTATTCAGCGAACAGATAACGCATGCCTTGAGCCTCGCTGAGCGCGTTGAGGCCGGCATGGTGGGCGTTA ATAAAGGCGGGATTTCAGACCCCTCCGCCCCCTTTGGCGGAATCAAAGAGTCAGGTGTAGGGCGAGAAGGCGGTTTTGAA GGGATCCACGAATTCCTAGAGTCAAAGCTCATTGCTTTGCCTCTTTAA Protein sequence : MTDGSKENKIMQTTLPEGAPTQLFLGGEFTDGHEGETFEVLNPSDGSILARVASASKHDAEEALNKAAKAQPLWAATSAR ERSDVLWNAYKSLLENSEKLAVIQSLELGRALPDSRAEVAYAAEFFRWFAEEAVRIRGDYRHSPTGNSRLIVHQQPVGVS LAITPWNFPLAMGTRKLGPALAAGCTMILKPASKTPLTMLYLARILKESGLPEGVVSVLPTADSSVISDLLDDPRLRKLT FTGSTEVGQKLAARAAQHSMKVSLELGGNAPYMVMEDADISVAAQAVATAKMRGAGQVCIAANRFLVHESIKDEFLDRVI DTMKSFTQGPATQEGVDFAALSGADQLEKVTELVNDALAHGATRVLGESLPAGLPEGGFYYPATVLDNVPLDARIVHEEI FGPVVAISTFRDDEEAIAMANNTPFGLAAYVFSEQITHALSLAERVEAGMVGVNKGGISDPSAPFGGIKESGVGREGGFE GIHEFLESKLIALPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 8e-115 | 53 |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 4e-85 | 45 |
