Gene Information

Name : fagB (CpCIP5297_0031)
Accession : YP_005693623.1
Strain : Corynebacterium pseudotuberculosis CIP 52.97
Genome accession: NC_017307
Putative virulence/resistance : Virulence
Product : Iron-enterobactin transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 25832 - 26818 bp
Length : 987 bp
Strand : -
Note : -

DNA sequence :
ATGACTCATCGCCGTTCCTGGTATACCGCACTTATTCTGACACTGCTGCTGGCCGTCTCCGCGGCGGTGGCTGTTTCGCT
GCCCGGCGCGGGCATCACCACGGCCAAAGTATGGTCGGTTTTTCAAGGCGATGATTCTAGCCTTGCTCACACCATCGTGT
TTTCTTGGCGAGCCCCGAGAATCGTCACAGCCCTCTTTGTAGGCGCTGCCTTAGGCATCGCAGGATCACTCTTCCAGGCA
TTAACCCGAAATCCGCTGGGCTCCCCGGACATTATCGGCTTTAATACGGGTGCTTATACCGGGGTTCTTCTCACCATGAT
GGCGGGCATGACCAGTTTTGCTTCCGTCGCTTTCGGCGCTCTCGCCGGAGGTCTGGCCACGGCCCTCGCAGTCATGGCGT
TCTCCGTTCGAGTGCGTATCGACGGCCTCCGCATCATCCTGGTAGGCCTTGGTGTTTCCGCAATGCTCTCGGCGTTTAAC
CGCTGGCTTATTACCCGTGGCGACCTCAACACCGCATTATCTGCTGCTAGCTGGGGCGCCGGAACTCTCAACGGGATCCG
CTGGGCCGCAGCCACCCCCGCCGTAATAGCACTAGGCATCATCGTGGCGCTGGCGCTGCTCCTGGGCTCACGCATCGATA
TCCTCAATCTTGGCGACGATACCGCCACGGCGCTTGGACTCCCGGTAAATCCCAGCAAGTTTGTCCTGTTGATCGTCGGA
GTCCTCCTCATTGCGACCACTACTGCCATCGCCGGACCTATTTCTTTTATCGCATTGGCCTCCCCTCATATTGCTCAACG
CATCACGGCCAGCCCTCGCACGCCTCTATTAGTCTCTGCACTTACGGGCGCAACATTGCTCCTTGTCGCAGATATCATTG
CGCAGCGGGCATTCGCACCCGTTCAGCTCCCCGTGGGGCTAGTCACTGTAGTTATTGGTGGCATTTACCTGCTATCTCTC
ATTGCCTCAGCTTCCCGACGCGCCTAA

Protein sequence :
MTHRRSWYTALILTLLLAVSAAVAVSLPGAGITTAKVWSVFQGDDSSLAHTIVFSWRAPRIVTALFVGAALGIAGSLFQA
LTRNPLGSPDIIGFNTGAYTGVLLTMMAGMTSFASVAFGALAGGLATALAVMAFSVRVRIDGLRIILVGLGVSAMLSAFN
RWLITRGDLNTALSAASWGAGTLNGIRWAAATPAVIALGIIVALALLLGSRIDILNLGDDTATALGLPVNPSKFVLLIVG
VLLIATTTAIAGPISFIALASPHIAQRITASPRTPLLVSALTGATLLLVADIIAQRAFAPVQLPVGLVTVVIGGIYLLSL
IASASRRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 1e-110 99
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 5e-111 99
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 5e-111 99
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 5e-111 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fagB YP_005693623.1 Iron-enterobactin transporter VFG0928 Protein 9e-45 48