Gene Information

Name : CpCIP5297_0028 (CpCIP5297_0028)
Accession : YP_005693620.1
Strain : Corynebacterium pseudotuberculosis CIP 52.97
Genome accession: NC_017307
Putative virulence/resistance : Unknown
Product : Insertion element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 22533 - 23573 bp
Length : 1041 bp
Strand : -
Note : -

DNA sequence :
TTGATTATGGCTTCACATCCATACCGGAATCACTGCAACGTCTGCGGCAATCTCCTAAAAAAGAACGGCAAAACGTCCAC
AGGAAAGACCCGGTACAGATGCAAGGGATGCGGAGCATCGTCGACAGCAACGCGATCGGGGACGCTGCATCAAAGACAGA
TGAAGGATTTTATAACGTGGCTTTTAGGCCCCACCTCGCGCTATAACAACGATATTTCGCGAGCTCAGCGTCGTTCAATG
TCCTGGTGCTGGCAGGTTCCCGTTCCACAGCCAGAGATGTTAGACAACGCGTACATATTGGTAATGGATAAAGGAGCTTC
TTTCCGCCCAGAGCACCTTCTCGTGGCATATAACAGCTCCCACGTACAGGGATGGAAATGGGTAGACAAAGACAATAAAA
CCGCATGTATGCAGGTGCATGACCATTTCTCACAGCCAAGTGCCGCAGTTATTGATGGAGGTCAATCAACGGCTCAGACA
ATCCAAGCCATATGGCCGGGGATACCAGTACGCCGATGTCTATCTCACATTAGAAAGAGCGTTGATCAAAAAACTTCACA
AACACCCCGCACTCAGCCTGCTATAGAGATAAAAGAGCTAACCGATTCCCTTAAGAATGTTTATACGTCCGAACAGGCTA
AGTTGTGGCTCGCTCGCTACGCCAGGTGGGAGGACAGATGGAAAGAACTGCTAAAACATCGCACCAATGTTTCTAAAGAT
AACTGCAGCATAGACGGTTACGAATGGGAGTGGACGCATAAAGAGTTACGAACAATCCGCTTCATGTATAGAAAATTGAT
CAAAAAGGAAGAACTCTTCCTTCCTTTTTACGGATCCGACATTGTTGCCCACAACGCAATTTTGTCTCGTCGCGATTCAC
AGCTGGGAGAGACCATCAGCACAGATATTACAAATCTTTTCAGTGCACACCGTGGTATCAACCACGATCATGGCTGCAGA
ATGGTGGAGTGGTATCTGAATAGTAAGACCGAGTCTCCTTTTATACCCGAGCGCATTATCAGCCATGATCACTGGAGATG
A

Protein sequence :
MIMASHPYRNHCNVCGNLLKKNGKTSTGKTRYRCKGCGASSTATRSGTLHQRQMKDFITWLLGPTSRYNNDISRAQRRSM
SWCWQVPVPQPEMLDNAYILVMDKGASFRPEHLLVAYNSSHVQGWKWVDKDNKTACMQVHDHFSQPSAAVIDGGQSTAQT
IQAIWPGIPVRRCLSHIRKSVDQKTSQTPRTQPAIEIKELTDSLKNVYTSEQAKLWLARYARWEDRWKELLKHRTNVSKD
NCSIDGYEWEWTHKELRTIRFMYRKLIKKEELFLPFYGSDIVAHNAILSRRDSQLGETISTDITNLFSAHRGINHDHGCR
MVEWYLNSKTESPFIPERIISHDHWR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_0026 YP_005684486.1 Insertion element protein Not tested PiCp 1 Protein 1e-132 97
Cp1002_0026 YP_005680305.1 Insertion element protein Not tested PiCp 1 Protein 2e-158 97
CpC231_0024 YP_005682395.1 Insertion element protein Not tested PiCp 1 Protein 2e-158 97
cpfrc_00028 YP_003782428.1 hypothetical protein Not tested PiCp 1 Protein 2e-158 97