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Name : lysS1 (CpCIP5297_1954) Accession : YP_005695476.1 Strain : Corynebacterium pseudotuberculosis CIP 52.97 Genome accession: NC_017307 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 2097361 - 2100591 bp Length : 3231 bp Strand : + Note : - DNA sequence : ATGCAGAAACGCTGGGAAACCCGAGTAATCCTCTTTACAGCACAGTTAGCCACTATCTGGCTGATTATTGGACTGATACT AAAACATATAAACATTAATCTCATTAGGGATATTAGTTTTGGTTTTTCCTTAATCGGCCTCCCCAACTTCCCCACTCTAT TTATCACCATCCTCATGGTGTTGCTCACATCGGGGATGCTGCGCGGACACCGAGGGGCGTTGCTGTTTTATCTTCTGGGA TTCCAGGTGCCGGATCTGCTTTCTGGCATCTTGTTCTTCGTCTTGGGTCTCTTCAACGATCCCGAGATTACCGGTGATAA TGCCAAGTACACGATTATCGCGTTCGCAGTTTCCACGCTGTTTTCTCTGTTCTATCTTGTTTGCGGATACCGCGCGCTTA AAGACTTCCCAGCTCGCGTTGTTGGTTCCTGGGTGCGGGCTCTCAGCACGCTCATCGTTGGCCTCATTATCTCGTTTGTT GTGATGTGGGGTGTGCTGGTCTTGCAGGAGCATCAAGACAGCAGCATAGCGGCAGCCTGGTCTTTCTTCACTGCCATCGG CCTCAGCCCTTCAGAACCGCCTTTCCCAACTGAGCTGCATAACCCGCACTTTATCCGGGTTATCGGTGGCATCCTTTCCT CCGTGGCGCTCTTTGCCGCCATCGCTATTCTCTTTGGTTCGCGCAAGCATGATGCAGCAACGGCTGAGGAACAGCTTCTT ACGCGTAAGTTACTGCTTAATCCTCCGTCGCCGGATTCACTCGCTTATTTTTCCACTCGCTATGACCGCAGCTTGATCAC CTCCCCGGATGAAAAGGCTGCCGTGTCCTTCCGCGTTGTCGACGGTGTATGCCTTGCCGCTGGTGACCCCCTCGGCGATC CAGAATCCTGGCCTGCGGCTGTGGAAAACTGGCGTGAGCATAGCCGTAAGAACGGTTGGGTTCTCGGTGCTGCTTCTGTC TCAGAAGCTGGCGCGAAAGCTTATGCTGCTGCAGGCATGAGCGTGATTACGCTTGGTGATGAGGCAGTAGTAGACGCAGA GAACTTCCATCTCAAGAATATGCCGGAGGTTCGCAAGGAGATAGCCGGACCGCGTAAAGCTGGCTATACCGTCCGGGTGC AGCGTCAGTCGCAGATCCCCGCTGAAGAGCTTCAGCATCTCTCCCAGCTCGCTGAAGCTTGGCGACGCGGCGACGAACGC GGATTCACCATGGCGTCTGGCCGCATCGGCGATCCCCGTGACTCGCGTACTGTCATAGTAACCGCCCACGATGCTGACGA TAACGTCATGGGCCTGCTCTCCTTTGTTCCGTGGGGACGCCGTGGGCTTTCCCTTGACGTTATGCGCCGTAATCCTGATG CCGTCGGCGGTGTCACAGAGTTTATGGTGGTTGGTCTGGCGCAGGAAGCCGGCAACCTTGGAATATCCAAGTTTTCCCTA AACTTTGTTACCTTCCGCGAAGCTCTCGATCGCGGTACCTATGTAGCGGCTTCCCTGAGGGAGCGGCTGCTGCTCAAACT GCTTCTCCTGTCTTCTCGCTGGTGGCAGATCCAATCGTTGTACCAATCCAACGTCAAGTATCATCCGCAATGGCAGTCGC GCTTCCTATGCATTGATCATGGATTCCACACGGCCCGCGTCCTTATTGCTTTTGCTAGCGCCGAGGGTTTCTTGCCTTGG ATGAAGGAATATGGGTCTCCTGTGGGCGATCCTCAGGAGATCGCCGCACTTGAATCCGCGGCTCTTATGCCGGCTATCGA GCCGCCAGCTTTATCGGTCCAAGAGCGCATGCGCAAGACAAAGCTGGAGGAGCTTGAGTCGCTCAGCATGAGCCCCTACC CGCCGGCTGTGCCTCGGACTACTTCTATTAAAGAATTACTCGCAGCAGATGCGACCCACACCGTTTCAGAAACACCGATC TCAGTCACCGGTAGAGTCGCTTTTATCCGTGATCATGGCGGAGTGGTCTTTGCGGATTTGGTTGAGGAGCACACAAAGCT CCAGCTAGTGATTGAGCGCAGTGCAGGACAGACGATGACCTTGTTTAAGCACTTGGTCAGCCGCGGTGACCTCATTTCTG CCACAGGTCAGTTGGGGGAGTCTCGCAACGGTACTCGTTCCCTCATTGTCTCTTCCTGGGATATGGCCGCTAAATCGCTT ACGCCGATGCCTCGCGTCCCGCTCAGCAACCCGCACTTGCGGGCAAAGTTCCGCCACATGGACTTTGCGCTTAATAAAAA AGCTACGGATATCTTCCTTGCCCGTTCCAAGGCCGTCAGCGCAGTACGCTCCGTGCTGCAAGAGCAGGGCTATATGGAAG CCGAAACCCCCATTCTGCAGACCATCCATGGTGGTGCAAATGCTCGCCCCTTCAGGACTCATATCCGAGCATACGATCAA AACCTCACGCTCAGGATCGCGCCCGAGCTGTACCTCAAGCGCCTGGTGGTCGGCGGCATCCCTCGTGTCTTTGAGATAGG AAGGAACTTCCGTAACGAGGGCGTGGATTCCACCCACAACCCCGAGTTCACGTCGCTGGAGGCCTACCAGTCTTATGGCA ACTGGGACACCATGCGGGTGCTTACAGAAGAGCTGATTCGTTCCGCAGCAATCGCCGTCTACGGGAAGCCAGAGGTGACT ACGGCGGACGGACAGGTTCTTGATCTCACCGGATCCTGGCCTGTTGTTCCTGTGTATGATGCGGTGTCTGAGGCCGTCGG CAAGCATATCTCCCCAAACGCAGATGTTTCCGAATATGCAGACATCGCGGAGAAATACGGCATCACCGCCGCCACCGTGG GTGATCTGGTCAACGAGCTTTACGACGAACTCATCGAACCCAACACCGTCTTCCCCACCTTCTACGCTGGATTCCCGGTG GAGACTTCGCCACTCACAATGGCAGACCCAGATCAGCCGCGCATCGCCCAGCGTTGGGACCTTGTAGCCTGCGGGATGGA GCTAGGCACCGCCTACACAGAGCTCGCGGACCCGCTGGAACAATACGCTCGTCTTTCCGATCAGTCTCTACGCGCCGCTG GCGGCGACGCCGAGGCAATGGAATTGGATGAGAACTTCCTCAAGGCGCTGCAGTTTGGCATGCCGCCCACAGGCGGCCTA GGAATCGGAATTGATCGCTTGGTCATGTTCCTTACCGGCCAAAACATCCGCGAAGTTCTCTCCTTCCCCTTTGTCAGACC AGATACGGACGGATCAGCTCGGGGTTGTTAA Protein sequence : MQKRWETRVILFTAQLATIWLIIGLILKHININLIRDISFGFSLIGLPNFPTLFITILMVLLTSGMLRGHRGALLFYLLG FQVPDLLSGILFFVLGLFNDPEITGDNAKYTIIAFAVSTLFSLFYLVCGYRALKDFPARVVGSWVRALSTLIVGLIISFV VMWGVLVLQEHQDSSIAAAWSFFTAIGLSPSEPPFPTELHNPHFIRVIGGILSSVALFAAIAILFGSRKHDAATAEEQLL TRKLLLNPPSPDSLAYFSTRYDRSLITSPDEKAAVSFRVVDGVCLAAGDPLGDPESWPAAVENWREHSRKNGWVLGAASV SEAGAKAYAAAGMSVITLGDEAVVDAENFHLKNMPEVRKEIAGPRKAGYTVRVQRQSQIPAEELQHLSQLAEAWRRGDER GFTMASGRIGDPRDSRTVIVTAHDADDNVMGLLSFVPWGRRGLSLDVMRRNPDAVGGVTEFMVVGLAQEAGNLGISKFSL NFVTFREALDRGTYVAASLRERLLLKLLLLSSRWWQIQSLYQSNVKYHPQWQSRFLCIDHGFHTARVLIAFASAEGFLPW MKEYGSPVGDPQEIAALESAALMPAIEPPALSVQERMRKTKLEELESLSMSPYPPAVPRTTSIKELLAADATHTVSETPI SVTGRVAFIRDHGGVVFADLVEEHTKLQLVIERSAGQTMTLFKHLVSRGDLISATGQLGESRNGTRSLIVSSWDMAAKSL TPMPRVPLSNPHLRAKFRHMDFALNKKATDIFLARSKAVSAVRSVLQEQGYMEAETPILQTIHGGANARPFRTHIRAYDQ NLTLRIAPELYLKRLVVGGIPRVFEIGRNFRNEGVDSTHNPEFTSLEAYQSYGNWDTMRVLTEELIRSAAIAVYGKPEVT TADGQVLDLTGSWPVVPVYDAVSEAVGKHISPNADVSEYADIAEKYGITAATVGDLVNELYDELIEPNTVFPTFYAGFPV ETSPLTMADPDQPRIAQRWDLVACGMELGTAYTELADPLEQYARLSDQSLRAAGGDAEAMELDENFLKALQFGMPPTGGL GIGIDRLVMFLTGQNIREVLSFPFVRPDTDGSARGC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
