Gene Information

Name : potD (CpCIP5297_0192)
Accession : YP_005693775.1
Strain : Corynebacterium pseudotuberculosis CIP 52.97
Genome accession: NC_017307
Putative virulence/resistance : Unknown
Product : Spermidine/putrescine-binding periplasmic protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 190610 - 191506 bp
Length : 897 bp
Strand : -
Note : -

DNA sequence :
ATGTGCTCGAATGATGTAACAGTATGTGAGCAGTGGAAGCATGATATTGCCCATGAGCTGGGACTGAAGGTTCGTTACGT
TAGTCTGCCCACCCAGGAAGCATTGAAGCGGCTGCAGACGGGGTCTCATGAATTTGATGTCTGGGTTGGGGGTCCCTCGG
AGAATTATCGCCTGGCTGCCCAGTTGGGTCTATTGCAGGCAGCGGATTTACCAGCGGCGGACGCTATTCCGGCGCAGTTT
AAAGACCCACAAAATCGGTGGTTTGGGGTGTATGCGTCGGTGTTGAGTGTGTGCAGTGATCGTGATGCCTTGAACCGCTT
AGGGGTTCCAGTTCCGCGTTCGTGGGCAGACGTGATGCGCCCTGAGCTACGCGGTTGGGTATCGGCACCGTCACCAGTGT
CCTCTGGAACTGGATATGCGATGTTGTTGAGCATGCAGGCAGCCGGATTGTCTCAAGAACAGATTGTCAGGATTGTGGAT
AATGTAGATCGTTTTACACGGTCAGGTAATGCGCCTAGTGACGTGGTAGCGCACGGTGAAGCTGCAGTGGCGATTTCTTA
TGAGCCGTATTGTCAAAATAAGACCACGCGTTTGGGACGGGATATGGAGATATCTTATCCTGCAGAAGGAACGTCATTTG
AGATTGCCTCTGGTGGCGTAGTGGTGCAGAGACATACTAAGTCGGCGGCGTATGAGGTGATGAATTGGTTGTTATCGCCG
TCGGGCCAAACGTCTGCTCTAAGAGCGGGATTGCCGCAGATACCTACAAACAATTTGGTTGCAAACAATATTTCTACGCG
ATTGAAAGACTCACACGGCATTGTTGCAGTCGATCCAACGGTTGCCGATTCTGAGCGTGAACAGTGGATGAGCTGGTTTT
CGGAGCGGCGCATATGA

Protein sequence :
MCSNDVTVCEQWKHDIAHELGLKVRYVSLPTQEALKRLQTGSHEFDVWVGGPSENYRLAAQLGLLQAADLPAADAIPAQF
KDPQNRWFGVYASVLSVCSDRDALNRLGVPVPRSWADVMRPELRGWVSAPSPVSSGTGYAMLLSMQAAGLSQEQIVRIVD
NVDRFTRSGNAPSDVVAHGEAAVAISYEPYCQNKTTRLGRDMEISYPAEGTSFEIASGGVVVQRHTKSAAYEVMNWLLSP
SGQTSALRAGLPQIPTNNLVANNISTRLKDSHGIVAVDPTVADSEREQWMSWFSERRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
potD YP_005680457.1 Spermidine/putrescine-binding periplasmic protein Not tested PiCp 3 Protein 8e-125 99
potD YP_005682548.1 Spermidine/putrescine-binding periplasmic protein Not tested PiCp 3 Protein 8e-125 99
cpfrc_00181 YP_003782581.1 hypothetical protein Not tested PiCp 3 Protein 8e-125 99
CDB402_0207 YP_005126720.1 ABC transporter substrate-binding protein Not tested Not named Protein 2e-112 89