|
Name : ciuF (CpCIP5297_1009) Accession : YP_005694570.1 Strain : Corynebacterium pseudotuberculosis CIP 52.97 Genome accession: NC_017307 Putative virulence/resistance : Virulence Product : efflux transporter Function : - COG functional category : - COG ID : - EC number : - Position : 1063465 - 1064790 bp Length : 1326 bp Strand : + Note : - DNA sequence : ATGCATAAAACGTTGATGCATAAGGTGGATAAGCCGAATGGCATTCGTCTACTCATAGGACAAGCGCTACTTTCTCGAAT CGCAAGCTCGGCTGAACTCGTAGCGCTCAACTGGTGGATTTTTCATACCACAGGATCATCTACTCTGGTTGCCCTTGTAA CCTTTGCCAGGCTTTTCCCATTGATTTTGGCTGCCCCCAAGTTGGGATCTATGTCTGATAGAAAAGATCCCACCCGGCTG CTTGCTTTTGTGCTTTTTACTGGCAGTGCATCCACACTGGCAGTAGCCGGGTTGGTTTTGGCGGCGGCACATACTTCATT TCTGAGCCCCGAAAAAACAGTATGGCTTGTGTGCGGTGTTGTGGCTATTCGTGCTTTTATAACTTCTGCCGAGCCAGCGA TTAGAAACGTAGTCTTAACCAGGCTGAGTAAAGACATAATGTTTATGTCGAATATGTCATCTTTATCATTGGTCTTAACC CTTTCGCTTGCAATCGGGCCAGCGCTTTCAGGTTTTTTGATGGTGATCGGTGGGGTTTCTTTTGCAATTTCTATGAGTGC AGCGCTGTATAGCATCGCTGCCATCATTGCCGTGAGAATATCCCTCCAAGAAAGAAAGCGGAAAGGTAAATTTAGCGCTT CCGAAAAAGAAGTAGCTATGTGTGAAGAACCTGGAGAACAAAAAAATAAAAAGACTTTTGCAATTATTCAAGCAGAAATA CGTAAGCAACCGGCTCTCGGCGCGCAACTAATTTTGGCGGCAGGCCCAATGCTTTTGGCGGCAGGCCCAATGCTTTTTGT CTTTCCTTATACTGCGATGCTCCCTGTTATAGCGCATTCGGCTTTCGAAGAGAATGCGGAACACGGCGTGGCACTTATGG CAGGATCCGCCGGCATCGGTGCGGCCTTGGGAGCGCTAGCGATAAAAAGATGGGTGAAAAAGCCCGCGGCGATTCTAGCG TTTTATAGTGCTTTTCTCCTGGTAATCCCGCTTGTCGGACTTGCCACGTCGCTTTCTACCGGAAACATCGCTTGGGTAAA TCTTTTACTTCTTGGGAGTATTGGGCTTATTGGGCAGCTGTATCGTACGACTAATCGAGTCGCAACATTGGTATTAGCTC CAGAAGTGCACCGAGGACTTTTTAGTGGAATTTCTCAAACAGACCGCGCACTCATTCCATGTGGGGCATTTTTCTTGGGA GTGATCGCAGATTATACGAGCGCAAGCGTGATGATCGTCTGCATGATCGTCGGCAATATTTTGCTTGTTTTGCCAGCCCT CGCACTAGTTCTGAGAAGCAGGGGAAGGAAGAGCGTTGGGGTATGA Protein sequence : MHKTLMHKVDKPNGIRLLIGQALLSRIASSAELVALNWWIFHTTGSSTLVALVTFARLFPLILAAPKLGSMSDRKDPTRL LAFVLFTGSASTLAVAGLVLAAAHTSFLSPEKTVWLVCGVVAIRAFITSAEPAIRNVVLTRLSKDIMFMSNMSSLSLVLT LSLAIGPALSGFLMVIGGVSFAISMSAALYSIAAIIAVRISLQERKRKGKFSASEKEVAMCEEPGEQKNKKTFAIIQAEI RKQPALGAQLILAAGPMLLAAGPMLFVFPYTAMLPVIAHSAFEENAEHGVALMAGSAGIGAALGALAIKRWVKKPAAILA FYSAFLLVIPLVGLATSLSTGNIAWVNLLLLGSIGLIGQLYRTTNRVATLVLAPEVHRGLFSGISQTDRALIPCGAFFLG VIADYTSASVMIVCMIVGNILLVLPALALVLRSRGRKSVGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ciuF | YP_005685434.1 | efflux transporter | Virulence | PiCp 4 | Protein | 4e-144 | 97 |
| ciuF | YP_003783393.1 | membrane protein | Virulence | PiCp 4 | Protein | 1e-146 | 97 |
| ciuF | YP_005681257.1 | efflux transporter | Virulence | PiCp 4 | Protein | 4e-144 | 97 |
| ciuF | YP_005683348.1 | efflux transporter | Virulence | PiCp 4 | Protein | 4e-144 | 97 |
