|
Name : CpCIP5297_1003 (CpCIP5297_1003) Accession : YP_005694564.1 Strain : Corynebacterium pseudotuberculosis CIP 52.97 Genome accession: NC_017307 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 1053456 - 1056152 bp Length : 2697 bp Strand : + Note : - DNA sequence : ATGTCACCGACCACGGGCGTAACCGCAGAACGCGTCAATGAAGACATAAAAGATGATGATAAGGCTAATGCAGAGTTCAA CCGATCTTCGACAAAATCCTCCACGAGGATGATACGCAATTATTTAGATAAAACACGGATTGCATGGATTCCTATCACGT CAATACGACGGATACTTTTCCCTATATTTACTTCCGGGAAAAGCATTATTAAACGAGTCCCGATCTCGTTTTTGTTGCTT GCTCTCTTATGGATTCTTTATGCAAGCATTGATCATCCGCGAGATGTGCTGGGATTGAACTCATCGGAGAAACTACCATC GTGGCACCTTCTTACTGCAGGCTTTACGGTAGGTTCGCATCAATCCGCAGTATTGGCAACTCTCGGAATTCTATTTTTGG CTGTTCCTGCTGAATTTGTGCTGGGATCGACTCGATTCTTAGTAGCAGTTGGGGTATTAAACGGAATTTCTATTCCACTA GGGATCCTTAGCGCTCGCTTTATTGAGACTTTAGGTCTTAATCAGTGGGGTAATGACCTGCTTAATGAGACACTACTGAG TCCGAGCGGCTGGATTTTTGGAACTGCTGCAGTCGCCTCTTCCGCAATGTCTACGTTGTGGCGGCGTCGACTCAGACTGG TGCTCTTTTCTCTGTCCTTTACTCTAGTGCTGTTTTCTGGGACCTTGACAGATTCAGTAGCAACGGTGGCTACCATCATC GGTACCATTATTGGGGCTGTTCAACTTGGGGGAAGAAAATACCAGAGAATAAAGATCATTTTCCGCCGTCCCTCGCTTAG AGAATCCCGTATTTTGGTAGCAGTGCTCTGTATGAGTGTGGCTTTGGGACCTGTTGTTGTTGCCTTTACCCCTTACGCGC ACGGTCCATTTTCTATGGTGACCAGCTTGATGTGGCAGCCGCATATTTCTTCAGCTGATGTGGCAGAGATTTGTGCACCA GATTATTCCTCACCAGAATGCATCGATGCACTAACTCTGACTCGACAAACGGGTTTTGCAGCTATTTTTGCTAACTTAGT CCCAGTTATTGCGCAGTTAATCTTCTGTATTGGCTTGATCCGTGGACGTCGAGTAGCTTGGGGCTTCTCTCTTGTGCTGC AGTGCTTGTCGCTTTTTGTGATCGCAGTTCAGCTTATTGCGATTACTGATGAACGCGGCAATTCGCTAATTTTCACAGTC AATTTCTTTGAAGTCATGTTGCCGTGGTTAGTCACACTATTGGCTCTTGGCGTTAGCCGACGACTGTTCTTTGTGAATGT AGAGCGTAAAGAGGTTGTTCGAAACCTGTCATTAATTTTGGCCACGTTTGTGATCACAGCGTTAACGTGGATAATAGGCG TTTATTATCTGGCAGATAACTTTAGCTCGTTGGATTCTTTGCTTTATGCCTTTTACGAATTGCCTAGTAGATATCTTCCT CCGGCTTTATCTTTAGTACTACAACACGTGCTGTATCCGGAGAGCCAACCTGCCTGGATACTTTATCAATGGGTAGGGGC AGTGTTCTGGATGGTGGCATTGTTTGCCCTTTACAGACTCATCATGAGCATCCCTGCGACTGGACATAATGCGTCGGATA TTGTCACAGCTCGCAAGATCCTACGTAATGGTTCTGGTGATCATCTGTCTTGGATGAGTATGTGGGACGGAAATAGTTTC TGGTTTGCTGCGCCTAAGTTAGAGGAGAATGCTGCTGAGACTCCAGCTGAAGACGAGTCCCAAACTGAGCCGCTCCCGCG TGGTTTTGTTGCGTTTAGATTGGTTAAAGGCATAGCGGTAACTCTCGGAGAACCTGTGGTTCTGGATCAGAAAGACAGGT TGGCTGTAGCGCGAGAATTCAAAGCATATGCGTCTGGGCGCGGATGGCGAGTCGCATGGTATTCCACGCGTGAGGAGTTT GCTGAGGAAATCCGTGTTGATGGTTTTAGAAAGCTACATGTTGCAGAAGAATCTGTTTTGCATACCACCAACACCGAATT TAAAGGGAAGAAGTTTCAAAACATCCGTACTGCGCGTAATCGAGCTGTTAAAGAAGGCATTAGCACAGTGTGGACATCTT GGGCAGAGGCCTCTCCTGATCTGCAAAATAGGATTGTTGTGCTTTCTGAGGAATGGGTCTCAGAAAGAGCATTGCCCGAA ATGGGATTCACGCTTGGTACTCTGGAAGAGCTCAAAGACTCTGAGACCAAGTTACTGGTTGCAGTCGATGAAAATGGGCA TGTACATGGTATAACAAGCTGGTTGCCTGTTCGCGAAAATGGTGTTCTTGCCGGGTACACTTTGGACTTCATGCGTCGCG ACGCCAACGGCTTCCGGCCTGTCATTGAGTTTTTGCTGGCTGAAGCACTGATTAAGGCGAAAGAACTCGGGTGCTCGTGG GTCTCACTTTCGGGAGCGCCGCTTGCCCCGCCATCGGGACAAACAATGCCTACGCTTCTCGACGCAACACTGAATAAGGC AGGAGAAGCTATCGAACCTTTGTATGGGTTTAGATCTTTGGCGGCATCCAAATATAAGTTCCACCCTGAACATCGAGCCT GGTATTTATGCTATGACGACGAGCTAGCTTTGCCGACAATCGGCCTAGCGGTTTCTCAATGTTATCTCCCTCAGCTAAGC GCTAAAGACGCTCGTGCCGCGCTTATTACTTGGGTACGAGCACAGCGAATGCCATAA Protein sequence : MSPTTGVTAERVNEDIKDDDKANAEFNRSSTKSSTRMIRNYLDKTRIAWIPITSIRRILFPIFTSGKSIIKRVPISFLLL ALLWILYASIDHPRDVLGLNSSEKLPSWHLLTAGFTVGSHQSAVLATLGILFLAVPAEFVLGSTRFLVAVGVLNGISIPL GILSARFIETLGLNQWGNDLLNETLLSPSGWIFGTAAVASSAMSTLWRRRLRLVLFSLSFTLVLFSGTLTDSVATVATII GTIIGAVQLGGRKYQRIKIIFRRPSLRESRILVAVLCMSVALGPVVVAFTPYAHGPFSMVTSLMWQPHISSADVAEICAP DYSSPECIDALTLTRQTGFAAIFANLVPVIAQLIFCIGLIRGRRVAWGFSLVLQCLSLFVIAVQLIAITDERGNSLIFTV NFFEVMLPWLVTLLALGVSRRLFFVNVERKEVVRNLSLILATFVITALTWIIGVYYLADNFSSLDSLLYAFYELPSRYLP PALSLVLQHVLYPESQPAWILYQWVGAVFWMVALFALYRLIMSIPATGHNASDIVTARKILRNGSGDHLSWMSMWDGNSF WFAAPKLEENAAETPAEDESQTEPLPRGFVAFRLVKGIAVTLGEPVVLDQKDRLAVAREFKAYASGRGWRVAWYSTREEF AEEIRVDGFRKLHVAEESVLHTTNTEFKGKKFQNIRTARNRAVKEGISTVWTSWAEASPDLQNRIVVLSEEWVSERALPE MGFTLGTLEELKDSETKLLVAVDENGHVHGITSWLPVRENGVLAGYTLDFMRRDANGFRPVIEFLLAEALIKAKELGCSW VSLSGAPLAPPSGQTMPTLLDATLNKAGEAIEPLYGFRSLAASKYKFHPEHRAWYLCYDDELALPTIGLAVSQCYLPQLS AKDARAALITWVRAQRMP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CpI19_0985 | YP_005685428.1 | hypothetical protein | Not tested | PiCp 4 | Protein | 0.0 | 99 |
| cpfrc_00986 | YP_003783387.1 | hypothetical protein | Not tested | PiCp 4 | Protein | 0.0 | 99 |
| Cp1002_0980 | YP_005681251.1 | hypothetical protein | Not tested | PiCp 4 | Protein | 0.0 | 99 |
| CpC231_0981 | YP_005683342.1 | hypothetical protein | Not tested | PiCp 4 | Protein | 0.0 | 99 |
