Gene Information

Name : xerD (CpCIP5297_0989)
Accession : YP_005694550.1
Strain : Corynebacterium pseudotuberculosis CIP 52.97
Genome accession: NC_017307
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1037723 - 1038655 bp
Length : 933 bp
Strand : +
Note : -

DNA sequence :
ATGACGTCCCCGAATATAGCCGCCGATCGTTGGTTAACGCATTTAGCCATAGAGCGCGGCGTCAGCGCCAATACTCTTAG
TAACTATCGACGCGATGTGCAAAGGTATCTTGATTGGATTGAGAGCCGCGGCATTGATGATTTAGGCATCTTGACCTCTC
GTGATGTTGAATCCTATGTTCTTGATCTACGGCGCGGGGATCCCGACACAGGCAAGCAGCCTTTGGCGGCCTCCTCGGCA
GGCCGTGCACTTGTGGTTGCGCGGGGACTTCATAAATTTGCAATGATGGAGGGGCTGATATCTGTTGACGTAGCTGGGGA
AGTCTCTCCGCCATCCACGGGGCGACATCTACCAGACACTCTGTCGGTTACAGAGGTAGAGGAACTTATCAGTGCGATTC
CTACGGGCAATATAGCCACTCCCGAGGACTTACGCGATGCAGCTTTGATTGAACTCCTCTACGGCACGGGTGCTCGGATA
TCAGAAATTATGAATCTCACAGTGGATGCGGTGACAGTGCTGGAAGAAACAGAAGGCATGTTGCGGATTGTGGGAAAAGG
GGATAAACATCGCATTGTTCCTGTCGGCTCGATGGCACAGAAAGCGTTACGACGCTACCTTGTACGGGCGCGGCCACAGC
TAACAAAGGGGAAAAGTCATGCGCTTTTTTTAAATAAACGCGGTGGAGCGCTATCACGGCAAAGTGCGTGGCAAATTCTT
AAAAGTTCTGCTCGTAGAGCAGGCGTGCAAAAAGATATTTCGCCGCACACTTTGCGCCATAGTTATGCATCGCACCTACT
TGAAGGTGGCGCCGATGTTCGCGTTGTACAAGAACTTTTGGGACATTCATCCGTTACTACCACACAGATTTATACGCATA
TTACGGCAGATAATCTGCGAATTGTATGGTCACAGTCTCATCCGCGGGCTTAA

Protein sequence :
MTSPNIAADRWLTHLAIERGVSANTLSNYRRDVQRYLDWIESRGIDDLGILTSRDVESYVLDLRRGDPDTGKQPLAASSA
GRALVVARGLHKFAMMEGLISVDVAGEVSPPSTGRHLPDTLSVTEVEELISAIPTGNIATPEDLRDAALIELLYGTGARI
SEIMNLTVDAVTVLEETEGMLRIVGKGDKHRIVPVGSMAQKALRRYLVRARPQLTKGKSHALFLNKRGGALSRQSAWQIL
KSSARRAGVQKDISPHTLRHSYASHLLEGGADVRVVQELLGHSSVTTTQIYTHITADNLRIVWSQSHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-43 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-43 43