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Name : lysS1 (Cp4202_1920) Accession : YP_005693411.1 Strain : Corynebacterium pseudotuberculosis 42/02-A Genome accession: NC_017306 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 2117443 - 2120673 bp Length : 3231 bp Strand : + Note : - DNA sequence : ATGCAGAAACACTGGGAAACCCGAGTAATCCTTTTTACAGCACAGTTAGCCACTATCTGGCTGATTATTGGACTGATACT AAAATATATAAACATTAATCTCATTAGGGATATTAGTTTTGGTTTTTTCTTAATCGGCCTCCCCAACTTCCCCACTCTAT TTATCACCATCCTCATGGTCTTACTCACATCGGGGATGCTGCGCGGGCACCGAGGGGCGTTGCTGTTTTATCTTCTGGGA TTCCAGGTGCCGGATCTGCTTTCTGGCATCTTGTTCTTCGTCTTGGGTCTCTTCAACGATCCCGAGATTACCGGTGATAA TGCCAAGTACACGATTATCGCGTTCGCAGTTTCCACGCTGTTTTCTCTGTTCTATCTTGTTTGCGGATACCGCGCGCTTA AAGACTTCCCAGCTCGCGTTGTTGGTTCCTGGGTGCGGGCTCTCAGCACGCTCATCGTTGGCCTCATTATCTCGTTTGTT GTGATGTGGGGTGTGCTGGTCTTGCAGGAGCATCAAGACAGCAGCATAGCGGCAGCCTGGTCTTTCTTCACTGCCATCGG CCTCAGCCCTTCAGAACCGCCTTTCCCAACTGAGCTGCATAGCCCGCACTTTATCCGGGTTATCGGTGGCATCCTTTCCT CCGTGGCGCTCTTTGCCGCCATCGCTATTCTCTTTGGTTCGCGCAGGCATGATGCAGCAACGGCTGAGGAACAGCTTCTT ACGCGTAAGTTACTGCTTAATCCCCCGTCGCCGGATTCACTCGCTTATTTTTCCACTCGCTATGACCGCAGCTTGATCAC CTCCCCGGATGAAAAGGCTGCCGTGTCCTTCCGCGTTGTCGACGGTGTATGCCTTGCCGCTGGTGACCCCCTCGGTGATC CAGAATCCTGGCCTGCGGCTGTGGAAAACTGGCGTGAGCATAGCCGTAAGAACGGTTGGGTTCTCGGTGCTGCTTCTGTC TCAGAAGCCGGCGCGAAAGCTTATGCTGCTGCAGGCATGAGCGTGATTACGCTTGGTGATGAGGCAGTAGTAGACGCAGA GAACTTCCATCTCAAGAATATGCCGGAGGTTCGCAAGGAGATAGCCGGACCGCGTAAAGCTGGCTATACCGTCCGGGTGC AGCGTCAGTCGCAGATCCCCGCTGAAGAGCTTCAGCATCTCTCCCAGCTCGCTGAAGCTTGGCGACGCGGCGACGAACGC GGATTCACCATGGCGTCTGGCCGCATCGGCGATCCCCGTGACTCGCGTACTGTCATAGTAACCGCCCACGATGCTGACGA TAACGTCATGGGCCTGCTCTCCTTTGTTCCGTGGGGACGCCGTGGGCTTTCCCTTGACGTTATGCGCCGCAATCCTGATG CCGTCGGCGGTGTCACAGAGTTTATGGTGGTTGGTCTGGCGCAGGAAGCCGGCAACCTTGGAATATCCAAGTTTTCCCTA AACTTTGTTACCTTCCGCGAAGCTCTCGATCGTGGTACCTATGTAGCGGCTTCCCTGAGGGAGCGGCTGCTGCTCAAACT GCTTCTCCTGTCTTCTCGCTGGTGGCAGATCCAATCGTTGTACCAATCCAACGTCAAGTATCATCCGCAATGGCAGTCGC GCTTCCTATGCATTGATCATGGATTCCACACGGCCCGCGTCCTTATTGCTTTTGCTAGCGCCGAGGGTTTCTTGCCTTGG ATGAAGGAATATGGGTCTCCTGTGGGCGACCCTCAGGAGATCGCCGCGCTTGAATCCGCGGCTCTTATGCCGGCTATCGA GCCGCCAGCTTTATCGGCCCAAGAGCGCATGCGCAAGACAAAGCTGGAGGAGCTTGAGTCACTCAGCATGAGCCCCTACC CGCCGGCTGTGCCTCGGACTACTTCTATTAAAGAATTGCTCGCAGCAGATGCGACCCACACCGTTTCAGAAGCGCCGATC TCAGTCACCGGTAGAGTCGCTTTTATCCGTGATCATGGCGGAGTGGTCTTTGCGGATTTGGTTGAGGAGCACACAAAGCT CCAGCTAGTGATTGAGCGCAGTGCAGGACAGACGATGACCTTGTTTAAGCACTTGGTCAGCCGCGGTGACCTCATTTCTG CCACAGGTCAGTTGGGGGAGTCTCGCAACGGTACTCGTTCCCTCATTGTCTCTTCCTGGGATATGGCCGCTAAATCGCTT ACGCCGATGCCTCGCGTCCCGCTCAGCAACCCGCACTTGCGGGCAAAGTTCCGCCACATGGACTTTGCGCTTAATAAAAA AGCTACGGATATCTTCCTTGCCCGTTCCAAGGCCGTCAGCGCAGTACGCTCCGTGCTGCAAGAGCAGGGCTATATGGAAG CCGAAACCCCCATTCTGCAGACCATCCATGGTGGTGCAAATGCTCGCCCCTTCAGGACTCATATCCGAGCATACGATCAA AACCTCACGCTCAGGATCGCGCCCGAGCTGTACCTCAAGCGCCTGGTGGTCGGCGGCATCCCTCGTGTCTTTGAGATAGG AAGGAACTTCCGTAACGAGGGCGTGGATTCCACCCACAACCCCGAGTTCACGTCGCTGGAGGCCTACCAGTCTTATGGCA ACTGGGACACCATGCGGGTGCTTACAGAAGAGCTGATTCGTTCCGCAGCAATCGCCGTCTACGGGAAGCCAGAGGTGACT ACGGCGGACGGACAGATCCTTGATCTCACCGGATCCTGGCCTGTTGTTCCTGTGTATGATGCGGTGTCTGAGGCCGTCGG CAAGCATATTTCCCCAGACGCAGATGTTTCCGAATATGCAGACATCGCGGAGAAATACGGCATCACCGCCGCCACCGTGG GTGATCTGGTCAACGAGCTTTACGACGAACTCATCGAACCCAACACCGTCTTCCCCACCTTCTACGCTGGATTCCCGGTG GAGACTTCGCCGCTCACAATGGCAGATCCAGATCAGCCGCGCATCGCCCAGCGTTGGGACCTTGTAGCCTGCGGGATGGA GCTAGGCACCGCCTACACAGAGCTCGCGGACCCGCTGGAACAATACGCTCGTCTTTCCGATCAGTCTCTACGCGCCGCTG GCGGCGACGCCGAGGCAATGGAATTGGATGAGAACTTCCTCAAGGCGCTGCAGTTTGGCATGCCGCCCACAGGCGGCCTA GGAATCGGAATTGATCGCTTGGTCATGTTCCTCACCGGCCAAAACATCCGCGAAGTTCTCTCCTTCCCCTTTGTCAGACC AGATACGGACGGATCAGCTCGGGGTTGTTAA Protein sequence : MQKHWETRVILFTAQLATIWLIIGLILKYININLIRDISFGFFLIGLPNFPTLFITILMVLLTSGMLRGHRGALLFYLLG FQVPDLLSGILFFVLGLFNDPEITGDNAKYTIIAFAVSTLFSLFYLVCGYRALKDFPARVVGSWVRALSTLIVGLIISFV VMWGVLVLQEHQDSSIAAAWSFFTAIGLSPSEPPFPTELHSPHFIRVIGGILSSVALFAAIAILFGSRRHDAATAEEQLL TRKLLLNPPSPDSLAYFSTRYDRSLITSPDEKAAVSFRVVDGVCLAAGDPLGDPESWPAAVENWREHSRKNGWVLGAASV SEAGAKAYAAAGMSVITLGDEAVVDAENFHLKNMPEVRKEIAGPRKAGYTVRVQRQSQIPAEELQHLSQLAEAWRRGDER GFTMASGRIGDPRDSRTVIVTAHDADDNVMGLLSFVPWGRRGLSLDVMRRNPDAVGGVTEFMVVGLAQEAGNLGISKFSL NFVTFREALDRGTYVAASLRERLLLKLLLLSSRWWQIQSLYQSNVKYHPQWQSRFLCIDHGFHTARVLIAFASAEGFLPW MKEYGSPVGDPQEIAALESAALMPAIEPPALSAQERMRKTKLEELESLSMSPYPPAVPRTTSIKELLAADATHTVSEAPI SVTGRVAFIRDHGGVVFADLVEEHTKLQLVIERSAGQTMTLFKHLVSRGDLISATGQLGESRNGTRSLIVSSWDMAAKSL TPMPRVPLSNPHLRAKFRHMDFALNKKATDIFLARSKAVSAVRSVLQEQGYMEAETPILQTIHGGANARPFRTHIRAYDQ NLTLRIAPELYLKRLVVGGIPRVFEIGRNFRNEGVDSTHNPEFTSLEAYQSYGNWDTMRVLTEELIRSAAIAVYGKPEVT TADGQILDLTGSWPVVPVYDAVSEAVGKHISPDADVSEYADIAEKYGITAATVGDLVNELYDELIEPNTVFPTFYAGFPV ETSPLTMADPDQPRIAQRWDLVACGMELGTAYTELADPLEQYARLSDQSLRAAGGDAEAMELDENFLKALQFGMPPTGGL GIGIDRLVMFLTGQNIREVLSFPFVRPDTDGSARGC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 100 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 100 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 100 |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
