Gene Information

Name : potD (Cp4202_0180)
Accession : YP_005691715.1
Strain : Corynebacterium pseudotuberculosis 42/02-A
Genome accession: NC_017306
Putative virulence/resistance : Unknown
Product : Spermidine/putrescine-binding periplasmic protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 192647 - 193648 bp
Length : 1002 bp
Strand : -
Note : -

DNA sequence :
GTGTTATCTAGATGGCTGCGATTGCTTGCTGTCTGCGTTGTGGCGATAGTGTCAGCGGTTACGGTGTATCGGACTTTGTT
TCCTACAAAAACTGCTGTGACTATCATGTGCTCGAATGATGTAACAGTGTGTGAGCAGTGGAAGCATGATATTGCCCATG
AGCTGGGACTGAAGGTTCGTTACGTTAGTCTGCCCACCCAGGAAGCATTGAAGCGGCTGCAGACGGGGTCTCATGAATTT
GATGTCTGGGTTGGGGGACCCTCGGAGAATTATCGCCTGGCTGCCCGGTTGGGTCTATTGCAGGCAGCGGATTTGCCAGC
GGCGGACGCTATTCCGGCGCAGTTTAAAGATCCACAAAATCGGTGGTTTGGGGTGTATGCGTCGGTGTTGAGTGTGTGCA
GTGATCGTGATGCATTGGACCGCTTAGGGGTTCCAGTTCCGCGTTCGTGGGCAGACGTGATGCGCCCTGAGCTACGCGGT
TGGGTATCGGCGCCGTCACCAGTGTCCTCTGGAACTGGATATGCGATGTTGCTGAGCATGCAGGCAGCCGGATTGTCTCA
AGAACAGATTGCCAGGATTGTGGATAATGTAGATCGTTTTACACGATCAGGTAATGCGCCTAGTGACGTGGTAGCGCACG
GTGAAGCTGCAGTGGCGATTTCTTATGAGCCGTATTGTCAAAATAAGACCACGCGTTTGGGACGGGATATGGAGATATCT
TACCCTGCAGAAGGAACGTCATTTGAGATTGCCTCTGGTGGCGTAGTGGTGCAGAGACATACTAAGTCGGCGGCGTATGA
GGTGATGAATTGGTTGTTATCGCCGTCGGGCCAAACTTCTGCTCTAAGAGCAGGATTGCCGCAGATTCCTACAAACAATT
TGGTTGCGGACAATATTTCTACGCGCTTGAAAGACTCACACGGCATTGTTGCAGTCGATCCAACGGTTGCCGATTCTGAG
CGTGAACAGTGGATGAGCTGGTTTTCGGAGCGGCGCATATGA

Protein sequence :
MLSRWLRLLAVCVVAIVSAVTVYRTLFPTKTAVTIMCSNDVTVCEQWKHDIAHELGLKVRYVSLPTQEALKRLQTGSHEF
DVWVGGPSENYRLAARLGLLQAADLPAADAIPAQFKDPQNRWFGVYASVLSVCSDRDALDRLGVPVPRSWADVMRPELRG
WVSAPSPVSSGTGYAMLLSMQAAGLSQEQIARIVDNVDRFTRSGNAPSDVVAHGEAAVAISYEPYCQNKTTRLGRDMEIS
YPAEGTSFEIASGGVVVQRHTKSAAYEVMNWLLSPSGQTSALRAGLPQIPTNNLVADNISTRLKDSHGIVAVDPTVADSE
REQWMSWFSERRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
potD YP_005680457.1 Spermidine/putrescine-binding periplasmic protein Not tested PiCp 3 Protein 5e-135 100
potD YP_005682548.1 Spermidine/putrescine-binding periplasmic protein Not tested PiCp 3 Protein 5e-135 100
cpfrc_00181 YP_003782581.1 hypothetical protein Not tested PiCp 3 Protein 5e-135 100
CDB402_0207 YP_005126720.1 ABC transporter substrate-binding protein Not tested Not named Protein 3e-122 89