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Name : clpC (Cp4202_1762) Accession : YP_005693263.1 Strain : Corynebacterium pseudotuberculosis 42/02-A Genome accession: NC_017306 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1941238 - 1943895 bp Length : 2658 bp Strand : - Note : - DNA sequence : ATGTTCGAGAGGTTTACTGATCGTGCACGTCGCGTGATCGTCCTGGCGCAGGAAGAAGCGCGCGGCCTTAACCACAATTA CATCGGCACTGAGCACATCCTGCTCGGACTTATCCATGAGGGTGAGGGCGTTGCTGCAAAGGCCCTCGAGTCCATGGGCA TCTCCTTGGAAGCGGTTCGCCAAGAAGTAGAAGAAATCATCGGGCATGGTTCCGAGCCTCCAGTTGGGCACATCCCTTTT ACCCCCCGTGCAAAGAAAGTCCTTGAACTTTCCTTACGTGAGGGACTACAGATGGGACATAAGTACATCGGTACTGAGTT CCTGCTGTTGGGCTTGATCCGAGAAGGCGAAGGCGTCGCGGCTCAGGTATTGGTAAAACTTGGTGCAGATCTACCGCGGG TGCGCCAGCAAGTTATTCAGCTGCTTTCGGGCTATGCGGGCGGGGAGAGCCCCGAGAACAATGAGTCTGGCGGAGAGGCT GTTGGTGCTGGTACCGGTGCAGCCCGTGCCGGCCGCGGATCCGGCGCTGGCGATCGTTCCAATTCTTTGGTCTTGGATCA ATTTGGTCGGAACCTCACTCAGGCTGCCAAGGACGGCAAGCTGGACCCGGTTGTAGGCCGCGAGAAAGAAATCGAGCGCA TCATGCAGGTTCTTTCGCGCCGCACCAAAAACAATCCCGTTTTGATCGGTGAGCCCGGTGTGGGAAAGACCGCCGTGGTC GAGGGACTGGCGCTAGATATTGTCAACGGCAAGGTGCCCGAGACTCTGAAGGATAAGCAGCTGTATTCCTTAGACCTAGG CTCCTTGGTCGCGGGGTCTCGTTATCGCGGTGACTTTGAGGAACGCCTGAAGAAGGTCCTCAAAGAGATTAATCAGCGCG GCGACATCATTTTGTTTATCGACGAGATCCACACCCTGGTGGGCGCCGGTGCGGCTGAAGGCGCTATCGACGCTGCTAGC CTGCTTAAGCCAAAGCTTGCTCGCGGAGAGCTGCAGACCATCGGAGCGACGACTCTCGACGAGTACCGTAAGCACATTGA GAAGGACGCTGCCCTTGAGCGTCGTTTCCAGCCAGTCAACGTGCCGGAACCAAGCGTGGAAATGACCATTGAGATTCTCA AGGGCCTGCGCGACCGCTACGAGGCACACCACCGCGTGTCCATCACAGACGGTGCGCTCGCTGCCGCGGCACAGTTGTCA GATCGCTATATCAATGACCGCTTTTTGCCTGATAAAGCAGTTGACCTTATAGATGAAGCCGGAGCGCGTATGCGCATCCA GCGCATGACCGCCCCTGAGTCGATCCGCAAGGTCGATGACCGCATCGCGGAGGTACGTCGGGAAAAAGAAGCTGCTATTG ATGCGCAGGACTTTGAAAAAGCCGCTGGCTTGCGTGACACCGAGCGGAAGCTGAACGAGGAACGCGCGGAGAAAGAAAAG CAATGGCGTTCTGGCGATCTGGAAGAAATCGCTGAAGTCGGCGAGGAGCAGATCGCGGAGGTTCTGGGCAACTGGACCGG AATTCCAGTGTTTAAGCTGACGGAAGAAGAGTCTTCTCGTCTGCTGCGCATGGAGGATGAGTTGCACAAGCGCATTATTG GGCAGGAGGACGCAGTTAAGGCTGTATCCCGTGCTATCCGCCGTACGCGCGCCGGACTGAAAGATCCGCGCCGTCCTTCG GGCTCCTTCATCTTTGCTGGCCCATCCGGTGTGGGTAAGACCGAGCTCTCTAAAGCATTGGCTAATTTCCTCTTTGGTGA TGACGATGCGCTGATTCAGATCGATATGGGCGAGTTCCATGATCGTTTCACCGCCTCGCGCCTGTTCGGTGCGCCTCCCG GATACGTTGGTTATGAGGAAGGCGGCCAGCTTACAGAGAAGGTACGTCGCAAGCCTTTCAGCGTTGTGCTTTTCGACGAG ATCGAGAAGGCCCACAAGGAGATCTACAACACGCTGCTGCAGGTGCTTGAAGACGGACGGCTTACCGACGGCCAAGGGCG CGTGGTGGACTTCAAGAACACCGTTCTGATCTTCACATCAAACCTGGGTACGCAGGATATCTCCAAGGCCGTGGGCATGG GCTTTAGCTCAGTCGGCGAGCATGATGCGGATGGCCAGTACTCCCGAATGAAGCAGAAGGTTAATGATGAGCTGAAGAAG CACTTCCGCCCTGAATTCCTTAACCGCATCGATGAGGTCGTGGTCTTCCATCAGCTAACTCAAGACCAGATCGTCCAGAT GGTGGACCTATTGGTTAGCCGCGTGGCAAAGGCCTTGGCTCAGAAAGACATGGGTATCGAGCTCACCGAGAAGGCAAAGA GCCTCTTGGCACGTAGAGGATTCGATCCGGTACTGGGCGCGCGTCCATTGCGTCGCACGATTCAGCGTGAGATCGAGGAT GCGCTCTCTGAAAAGATTCTCTTTGGAGAGGTCGGCGCCGGCGAGATTGTCACGGTAGATGTTGAAGGCTGGGATGGAGA ATCCAAGGATACGGACAAAGCTGTTTTCACATTCGTGCCGCGTCCTAAGCCACTGCCGGATTTTGCTACGGAATCTCCTG AGGTAGTGGAGGCTCAGCAAGCTGTGGTCGACGCTGCAGATGACCCAGAGATGGTTCCTGAAGCTGATTTTGACGTAGAG GAAGCCAAGGAATCCTAA Protein sequence : MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGSEPPVGHIPF TPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGVAAQVLVKLGADLPRVRQQVIQLLSGYAGGESPENNESGGEA VGAGTGAARAGRGSGAGDRSNSLVLDQFGRNLTQAAKDGKLDPVVGREKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVV EGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAAS LLKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVNVPEPSVEMTIEILKGLRDRYEAHHRVSITDGALAAAAQLS DRYINDRFLPDKAVDLIDEAGARMRIQRMTAPESIRKVDDRIAEVRREKEAAIDAQDFEKAAGLRDTERKLNEERAEKEK QWRSGDLEEIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLRMEDELHKRIIGQEDAVKAVSRAIRRTRAGLKDPRRPS GSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDE IEKAHKEIYNTLLQVLEDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISKAVGMGFSSVGEHDADGQYSRMKQKVNDELKK HFRPEFLNRIDEVVVFHQLTQDQIVQMVDLLVSRVAKALAQKDMGIELTEKAKSLLARRGFDPVLGARPLRRTIQREIED ALSEKILFGEVGAGEIVTVDVEGWDGESKDTDKAVFTFVPRPKPLPDFATESPEVVEAQQAVVDAADDPEMVPEADFDVE EAKES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 94 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-98 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005693263.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 58 |
| clpC | YP_005693263.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 2e-151 | 52 |
