Gene Information

Name : fagA (CpPAT10_0030)
Accession : YP_005689496.1
Strain : Corynebacterium pseudotuberculosis PAT10
Genome accession: NC_017305
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 26949 - 28016 bp
Length : 1068 bp
Strand : -
Note : -

DNA sequence : 
ATGGTTTCGACCGCCTCATCCAACCCTAGCCCGATCCGTGGCTTCCTTCGGAAGTCTCAGCCCAACGTACAGCGAACGCG
CCGCTCACTGCTTGTCGTAGTGCTGCTGTTAGCGGTACTGCTTGTCGTAGGAAGTATCGCCAGCGTCATGATCGGCGCAA
GGCTTATTCCCCTTCCTGAGATCCTTAACGCTCTATTCCATCCAGATCCCACTAATGTGTCTTCCACCATTGTGTGGGAC
CGACGCGTTCCGCGCACCCTCCTAGCCATTGTCGCCGGCATGTCTCTTGGTCTTGCTGGCACGCTCTCTCAGGCCCTCAC
TCGCAATCCGTTAGCAGACACCGGCGCACTGGGAATTAATTCGGGCGCTGCTTTTGCCATCGTGGTCGGCATCGCTCTTT
TCGGTGCTTCTTCACCATGGGCATTCTTAGCACTAGCACTCCTGGGAGCATGTGGTGCAGCAGCGGTGGTGTACTCGGTG
GGTACTCATCGATCAGCAACAGCAGACCCAGTCCGGCTGGTTTTATCTGGTGTGGCTCTGAGCGCAATCCTTTCAGGAAT
CGGCGAGGGGCTCTCCTTAGTTAATCCGCAGGCCTTTGATCGTTTAAAGAGTTGGATGGTAGGAAGCGTGGACGTCGGCA
CGCTTATGCCTCTGGGAATCGCCGGTGTGGGTCTTGCCTTCGGCATTGTGCTCACAATCGCTTGCGCTCACGGACTTAAC
GCACTTGCTTTGGGTGATGCCATGGCTACATCTATTGGCGCATCCACGGCACGCATCCGCTTCATTTCTTTTATTGCCGT
AGTAATACTTGCGGCCAGTGCAACCGCTGCAGCTGGAGTCATTATCTTCCTCGGCCTTATGGTTCCCCATGTCGCCCGCT
GGATTGTGGGACCTGATCTGCCTCGTGTCCTCATCACTTCCCTGCTTCTTGGACCGCTCGTTCTCGTGGTAGCGGATATT
GTGGGGCGTTTGATTGTCCCCGGCGAATTTCCCGCCGGAGTGGTTGTGTCCTTTATCGGCGCACCATTTCTCATCGCTTA
TGCCCAAAGCAGGAAGGGAGACATGTGA

Protein sequence : 
MVSTASSNPSPIRGFLRKSQPNVQRTRRSLLVVVLLLAVLLVVGSIASVMIGARLIPLPEILNALFHPDPTNVSSTIVWD
RRVPRTLLAIVAGMSLGLAGTLSQALTRNPLADTGALGINSGAAFAIVVGIALFGASSPWAFLALALLGACGAAAVVYSV
GTHRSATADPVRLVLSGVALSAILSGIGEGLSLVNPQAFDRLKSWMVGSVDVGTLMPLGIAGVGLAFGIVLTIACAHGLN
ALALGDAMATSIGASTARIRFISFIAVVILAASATAAAGVIIFLGLMVPHVARWIVGPDLPRVLITSLLLGPLVLVVADI
VGRLIVPGEFPAGVVVSFIGAPFLIAYAQSRKGDM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 2e-125 100
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 2e-125 100
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 2e-125 100
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 2e-125 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fagA YP_005689496.1 hypothetical protein VFG0926 Protein 2e-36 46