Gene Information

Name : ciuD (CpPAT10_0984)
Accession : YP_005690434.1
Strain : Corynebacterium pseudotuberculosis PAT10
Genome accession: NC_017305
Putative virulence/resistance : Virulence
Product : Iron ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1063365 - 1064186 bp
Length : 822 bp
Strand : +
Note : -

DNA sequence : 
ATGTTTGACCGAAAAAATGATAACGCATGTGTATCTAGTGAACCCCAGCTCGCTTGTAGGGGTGTTTCCGCGGGATATGG
CGGAGATCTGATAATAAAAGATATCTCGGTGACTATTCCCGCTGGGAAAATTACTGCGTTGATTGGTCCGAATGGCTGTG
GCAAATCAACTTTGCTCAAACTATTAGGGAATCAATTAAAAGGTGAGCACGGGCAAGTTACATTAGGCGAGCGCGATCTT
GACACCTTTTCTGCTCGTGATTTTGCCCGTCAGGTTTCTTTTTTACCTCAGCAACCGGTTGTTCCTGAAGGCATGACAGT
GCGGGAGCTTATCGCTTTTGGCCGTTATCCGTACACGGGTGCCTTTGCTTCTTTAAGCGATTCAGATCAGCGAGCTATCG
ACGAGGCCTCAAGGCTCACTAGCGTTGATACCTTCTTAGGGCAATCTGCGATGGAATTGTCCGGCGGCCAAAAACAACGC
ATGTGGATCGCGATGACTCTAGCGCAGGAGACCTCTATTATGCTGCTGGATGAGCCAACCACGTTTTTAGATCCTGCACA
TCAATTAGCTATTTTGGAATTAGTCAAGTCCCTGAATGAGAAGGGAAGGACTATCGTGATGGTAGTCCATGATATGGCAC
ATGCTGCTAAGTTCTCTGATCATGTTGTGGTGATGAAGAACGGAAAAATTCTTGAACAGGGGCCAACAGAAACCACTTTG
AACCCAACACTGATTAAGAAAGCTTTTAGTATTTCCACGCTTATGGTGACAGATCCAGAAACTGGGAGAAAGCTTCCCAT
TGCTTATGGAATTCACAAGTAA

Protein sequence : 
MFDRKNDNACVSSEPQLACRGVSAGYGGDLIIKDISVTIPAGKITALIGPNGCGKSTLLKLLGNQLKGEHGQVTLGERDL
DTFSARDFARQVSFLPQQPVVPEGMTVRELIAFGRYPYTGAFASLSDSDQRAIDEASRLTSVDTFLGQSAMELSGGQKQR
MWIAMTLAQETSIMLLDEPTTFLDPAHQLAILELVKSLNEKGRTIVMVVHDMAHAAKFSDHVVVMKNGKILEQGPTETTL
NPTLIKKAFSISTLMVTDPETGRKLPIAYGIHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-129 100
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-129 100
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-129 100
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-129 100
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-96 70
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-51 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-47 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-47 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-47 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-47 42
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-48 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ciuD YP_005690434.1 Iron ABC transporter ATP-binding protein BAC0164 Protein 2e-51 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ciuD YP_005690434.1 Iron ABC transporter ATP-binding protein VFG1042 Protein 2e-51 42
ciuD YP_005690434.1 Iron ABC transporter ATP-binding protein VFG0925 Protein 5e-51 42