Gene Information

Name : Clo1313_0903 (Clo1313_0903)
Accession : YP_005687422.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1052483 - 1052887 bp
Length : 405 bp
Strand : +
Note : manually curated; TIGRFAM: single-strand binding protein; KEGG: cce:Ccel_0056 single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n

DNA sequence :
ATGAACAAAGTTATTTTAATGGGGAGATTGACACAAGACCCGGAACTTAGGCACACTACCACCGGTAAAGCCGTATGCCA
TTTTCGGCTCGCGGTAAACAGAAGGTTTTCAAGACAGGGAGAACAGGAACAAGCTGATTTTTTCCCAATAGTTGCATGGG
AAAAGACCGGTGAATTTTGTAACAATTATTTCCGAAAAGGACAGCAGGTTGCTATAATTGGCAGACTTCAAAACAGATCC
TGGAACGATGAACAGGGCAACAAGAGAACCATTACGGAAATTATTGCAGATGAGGCATACTTTGCCGACAGCAAGAAGGA
TAACTACACCTCGGGCGGTTTTGAACCTGAAAATACGGATGGCGAAGGATTTTTCCCGACAGAAGATGATGAACTTCCAT
TTTAA

Protein sequence :
MNKVILMGRLTQDPELRHTTTGKAVCHFRLAVNRRFSRQGEQEQADFFPIVAWEKTGEFCNNYFRKGQQVAIIGRLQNRS
WNDEQGNKRTITEIIADEAYFADSKKDNYTSGGFEPENTDGEGFFPTEDDELPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 3e-18 43
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-17 43
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 8e-18 42
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 5e-15 41
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 1e-17 41