|
Name : Clo1313_0885 (Clo1313_0885) Accession : YP_005687404.1 Strain : Clostridium thermocellum DSM 1313 Genome accession: NC_017304 Putative virulence/resistance : Unknown Product : transposase IS200-family protein Function : - COG functional category : - COG ID : - EC number : - Position : 1034668 - 1035144 bp Length : 477 bp Strand : + Note : PFAM: transposase IS200-family protein; KEGG: dhd:Dhaf_3832 transposase IS200-family protein DNA sequence : ATGCGTGATAATGCTAGTTTAGCACATACGCAATGGAATTGTAAATACTATATAGTATTTGCACCAAAATATAGGAGACA AGTAATATACGGTAAAATAAAGAAAGACATAGGGCAAATATTAAGAAAGCTATGCGAAATGAAAGGAGTAGAAATAATAG AAGCAAGCCTTTGTCCCGATCATATACATATGTTAGTTAGTATACCACCAAAAATAAGTGTATCAAGTTTTATGGGATAT TTGAAAGGAAAAAGCTCGTTAATGATTTTTGATAGGCATGCAAATTTAAAGTATAAATATGGGAACAGACATTTTTGGTG CAGGGGATACTATGTAGACACAGTAGGAAGGAACAGAAAAGCAATTGAGCAATATATAAGGAGACAATTACAAGAAGATA TAGCAAGCGACCAGATAAGTTTAAATGAGTATATAGACCCGTTTACGGGTGAGCGAGTAAATAAAAGCAAAAAATAA Protein sequence : MRDNASLAHTQWNCKYYIVFAPKYRRQVIYGKIKKDIGQILRKLCEMKGVEIIEASLCPDHIHMLVSIPPKISVSSFMGY LKGKSSLMIFDRHANLKYKYGNRHFWCRGYYVDTVGRNRKAIEQYIRRQLQEDIASDQISLNEYIDPFTGERVNKSKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SP_1064 | NP_345538.1 | IS200 family transposase | Not tested | PPI-1 | Protein | 4e-54 | 75 |
| CPR_0382 | YP_697711.1 | IS1469, transposase | Not tested | Not named | Protein | 8e-48 | 70 |
| EF0615 | NP_814372.1 | IS200 family transposase | Not tested | Not named | Protein | 3e-41 | 67 |
| ef0123 | AAM75324.1 | EF0123 | Not tested | Not named | Protein | 2e-41 | 67 |
| tnpA | NP_455584.1 | transposase for insertion sequence element is200 | Not tested | SPI-5 | Protein | 2e-45 | 63 |
