Gene Information

Name : Clo1313_0872 (Clo1313_0872)
Accession : YP_005687391.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Unknown
Product : homoserine dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1012572 - 1013819 bp
Length : 1248 bp
Strand : +
Note : PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: cce:Ccel_1452 homoserine dehydrogenase

DNA sequence :
ATGGTTAATATAGCAGTGATGGGATACGGAGTGGTCGGCTCCGGAGTTGTTGAAGTTATAAGAAAAAACAGTGTCAGCAT
ATCAAAGAAAGCGGGTCAGGAGATTCGCGTAAAAAAAATACTGGATATCAGGGATTTTCCGGACAGTCCTGAACGGGATT
TGTTTACAAAGAATCCTGATGAAATTTTTGATGACCCGTCAATAGGAATAGTTGTTGAGACCATAGGCGGAATAGGTGCT
GCGTACGAATTTACAAAGAAGGCTTTGAGCAAAGGAAAGAATGTTGTAACCTCGAACAAGGAGCTGGTTGCAACCCATGG
ACCTGAACTTTTGAAGCTTGCAAAGGAAAATGGAGTAAACTATCTGTTTGAAGCAAGTGTCGGCGGTGGAATTCCCATTA
TCAGGCCTTTGAACCGCTGCCTTGCCGCAAATGAAATACACAGCATCATAGGAATACTCAACGGAACTACGAACTACATA
TTAACACAGATGAAAAGGCAGGGAAAAGATTTTGACGAGGCTTTGAAAGAGGCACAGCAGAAAGGATATGCGGAAGCGGA
TCCAACCGCGGACATAGAAGGGCATGATGCATGCAGAAAAATTGCAATACTCTCATCCATTGCGTACAATGAATTTGTTG
ATTACAAAAAGATACATACGGAAGGCATAAAAAAAATAAGCCTTGCGGATATGAAATATGCCGAAAGCATGGATTCAACC
ATCAAGCTTGTCGCCATAAGCGAAAAAATCGGTGACGGTATTATGGCAAGGGTTGCTCCTGCGATAGTAAGCAGCAAAAG
TCCGCTTTACAGTGTTGAAGATGTTTTTAATGCTATTGTTGTGAGAGGAGATGCAATTGGAGAAGTGATGTTTTACGGCC
CGGGAGCGGGCAAGCTCCCCACGGCAAGCGCCGTTGTGGCGGATGTAATTGAAATTGTGAAGCATTGGGGTACCTGCGGC
AGCTATAACTGGGTTGTAAAAGACGGCGGCAACGTCATTGATTTGAAAGAAACCAGGACAAGGTATTTTGTGAGACTGAA
AGTGGAGAATGAAGCTGAAGCTAAAAAAGCGGTGGAGAATGCTTTTGGAAATGTTGAATGGGTAAAAGCGTATGATGCAA
GTGTACAGGATGAATTGGCATTTGTTACTTCCTGCGTTTTGGAGAAAGACTATTGCAATTCTCTTCAACAACTTAAAGGC
AGCAAAGCTGTAAAAGATGTGGTAAATGCCATAAGAGTCCTGGACTAA

Protein sequence :
MVNIAVMGYGVVGSGVVEVIRKNSVSISKKAGQEIRVKKILDIRDFPDSPERDLFTKNPDEIFDDPSIGIVVETIGGIGA
AYEFTKKALSKGKNVVTSNKELVATHGPELLKLAKENGVNYLFEASVGGGIPIIRPLNRCLAANEIHSIIGILNGTTNYI
LTQMKRQGKDFDEALKEAQQKGYAEADPTADIEGHDACRKIAILSSIAYNEFVDYKKIHTEGIKKISLADMKYAESMDST
IKLVAISEKIGDGIMARVAPAIVSSKSPLYSVEDVFNAIVVRGDAIGEVMFYGPGAGKLPTASAVVADVIEIVKHWGTCG
SYNWVVKDGGNVIDLKETRTRYFVRLKVENEAEAKKAVENAFGNVEWVKAYDASVQDELAFVTSCVLEKDYCNSLQQLKG
SKAVKDVVNAIRVLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 4e-47 42
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 4e-47 42