Gene Information

Name : Clo1313_0790 (Clo1313_0790)
Accession : YP_005687314.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Unknown
Product : transposase mutator type
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 912061 - 913284 bp
Length : 1224 bp
Strand : -
Note : PFAM: transposase mutator type; KEGG: tpd:Teth39_2032 transposase, mutator type

DNA sequence :
ATGGCAAGAAAAAGGATAATAACACCAGAAAAGAAAGAGCTTATCAGAAATCTCATTTCTGAGTACAACATTACTTCAGC
AAAGGATTTGCAGGAAGCATTGAAGGATCTGCTCGGAGATACGATACAAAATATGTTGGAAGCAGAGCTGGATGAACATC
TCGGATATGAAAAGTACGAATCAACTGAAGAAGCGAAATCAAATTACCGTAACGGGTACACATCAAAAACATTAAAGTCA
AGTGTAGGGCAAGTGGAAATAGATATCCCGCGGGACCGGAATGCAGAATTCGAGCCGAAAATTGTTCCCAGGTATAAAAG
GGACATTTCAGAAATTGAAAATAAAATAATAGCAATGTATGCGCGGGGGATGTCTACCAGAGAAATCAACGAGCAGATAC
AGGAAATCTACGGATTTGAAGTATCTGCCGAGATGGTAAGTAAGATCACTGATAAAATACTACCTGAGATAGAAGAGTGG
CAGAAAAGGCCTCTGGGAGAGGTTTATCCGATAGTATTTATTGACGCAATTCATTTTTCAGTAAAAAATGACGGCATTGT
TGGGAAGAAGGCCGTATATATTGTGCTGGCGATTGATATAGAAGGGCAGAAAGATGTTATCGGTATTTATGTAGGAGAAA
ATGAGAGCTCAAAATTCTGGCTGAGTGTCTTAAATGACCTTAAAAACAGGGGTGTTAAAGACATTCTGATTCTCTGTGCT
GATGCACTTTCAGGGATAAAGGATGCAATCAATGCGGCTTTTCCGAATACTGAATATCAGAGGTGTATAGTACACCAGAT
AAGAAACACGCTAAAGTATGTGTCAGATAAAGACCGAAAGGAATTTGCCAGGGACTTGAAACGGATATATACGGCTCCGA
ATGAGAAGGCAGGGTACGACCAGATGCTTGAGGTTTCAGAGAAATGGGAGAAGAAATACCCGGCAGCTATGAAGAGCTGG
AAGAGCAATTGGGATGTTATTTGTCCATTTTTTAAGTATTCGGAGGAACTACGTAAAATCATGTATACGACCAATACTAT
TGAGAGCCTGAATAGCAGTTATAGAAGGATAAACAAATCAAGGACAGTATTTCCTGGCGACCAGTCACTTTTAAAGAGCA
TATATTTAGCTACAGTGAAGATTACTTCAAAATGGACGATGCGTTACAAAAACTGGGGTTTGATACTGGGACAGCTACAG
ATTATGTTCGAAGGGCGTATATAG

Protein sequence :
MARKRIITPEKKELIRNLISEYNITSAKDLQEALKDLLGDTIQNMLEAELDEHLGYEKYESTEEAKSNYRNGYTSKTLKS
SVGQVEIDIPRDRNAEFEPKIVPRYKRDISEIENKIIAMYARGMSTREINEQIQEIYGFEVSAEMVSKITDKILPEIEEW
QKRPLGEVYPIVFIDAIHFSVKNDGIVGKKAVYIVLAIDIEGQKDVIGIYVGENESSKFWLSVLNDLKNRGVKDILILCA
DALSGIKDAINAAFPNTEYQRCIVHQIRNTLKYVSDKDRKEFARDLKRIYTAPNEKAGYDQMLEVSEKWEKKYPAAMKSW
KSNWDVICPFFKYSEELRKIMYTTNTIESLNSSYRRINKSRTVFPGDQSLLKSIYLATVKITSKWTMRYKNWGLILGQLQ
IMFEGRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 1e-98 54
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 2e-87 46