Gene Information

Name : Clo1313_0721 (Clo1313_0721)
Accession : YP_005687250.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 829059 - 829796 bp
Length : 738 bp
Strand : +
Note : manually curated; PFAM: ABC transporter related; KEGG: amt:Amet_0366 ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATCTCTGATGCAAAAAAACAGAAAGAACCGATAATTAGTATTACAAATCTGAGTAAAATCTATAAAGTGGGTTCGGAAAA
AGTAGTGGCTCTCCAGGACATTAACATGGAAATTTACAAAGGTGAATTTTGTTGCTTTTTGGGTACTTCCGGCTCGGGAA
AATCAACGCTTTTGAATGTGCTTGCCGGACTTGAAAAGCCAACCAGGGGAAGTATAAAAATCAAAAATGTAAATATTGAA
AAGCTTAATGAAAAAAAACTTGCGGCATTTCGACAGGATAATGTTGGCTTTGTATTTCAGGCATACAATCTTGTCAGTCA
TCTGGACGCTGTTGAAAATGTCAGCCTTCCTCTCATGTTCAAAGGCGTACCCAAAAAGGAAAGGACGAAAAGAGCTGTTG
AGCTTTTGAAAGCAGTGGGGCTTTCCAAACATCTCAGACACAAGCCCACCCAGATGAGCGGAGGTCAACAGCAAAGAGTC
GGCATAGCAAGAGCCTTTGTTACAAATCCCGAAATTGTATTTGCCGATGAGCCTACAGGAAATCTGGATTCAAAGACATC
CATGGAGGTTCTGGAGCTTATGGCGGGTTTGGCAATGAAAAACCGCCAGACTTTGATTATGGTTACCCATGACCTTAATA
TTGCAAAACGGGCTGACAGAATAATTTACATATTGGACGGAAGAATTGAAGGAATAGAAGAAAATCAGTATGCGGGGGTT
ACGTATGAGCAAAATTAA

Protein sequence :
MSDAKKQKEPIISITNLSKIYKVGSEKVVALQDINMEIYKGEFCCFLGTSGSGKSTLLNVLAGLEKPTRGSIKIKNVNIE
KLNEKKLAAFRQDNVGFVFQAYNLVSHLDAVENVSLPLMFKGVPKKERTKRAVELLKAVGLSKHLRHKPTQMSGGQQQRV
GIARAFVTNPEIVFADEPTGNLDSKTSMEVLELMAGLAMKNRQTLIMVTHDLNIAKRADRIIYILDGRIEGIEENQYAGV
TYEQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-37 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-37 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clo1313_0721 YP_005687250.1 ABC transporter CP001581.1.gene598.p Protein 2e-41 46
Clo1313_0721 YP_005687250.1 ABC transporter NC_012469.1.7686878. Protein 2e-42 46
Clo1313_0721 YP_005687250.1 ABC transporter CP001581.1.gene798.p Protein 7e-38 44
Clo1313_0721 YP_005687250.1 ABC transporter NC_008702.1.4606598. Protein 1e-38 43
Clo1313_0721 YP_005687250.1 ABC transporter NC_012469.1.7685735. Protein 8e-35 43