Gene Information

Name : Clo1313_0388 (Clo1313_0388)
Accession : YP_005686929.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Unknown
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 420393 - 421553 bp
Length : 1161 bp
Strand : +
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: amt:Amet_3707 cystathionine gamma-synthase

DNA sequence : 
ATGATGAAAGTTGGGAATGTGTCAAACTATAGTATAAGTACAAAAGTGGTACATGGTTCAAAGTGTTATGACCCGCATAC
CGGGGCGGTAAGTTTCCCCATATATCAAAGTGCTACTTTCAGACATCCGGCGCTCTATCAGACAACGGGTTATGATTATT
CACGCTTGCAGAATCCGACAAGGGAAGAACTTGAAAACACCATTGCAAATATCGAAAACGGGAAGTTTGGATTTGCCTTT
TCCAGCGGCATGGCGGCAGTATCCACCATACTGTCTCTTTTTTCACCTAAAGACCATATCATTGTTTCCGATGACCTTTA
TGGTGGTACTTACAGACTGTTTGAGGAAATATACAAAAAATACGGTTTGGAATTTTCCTATGTCAACACAAGCAGGATTC
AGGACATAGAAGAAGCTGTGAAAGAGAACACAAAAGCGTTTTTTATTGAGACCCCCACAAACCCGATGATGAAGGTGGCC
GATTTAAAGACGATATCGCGGTTTGCAAAAGACAGGAAAATACTTTTGATTGTGGACAATACTTTTCTTACACCGTATTT
TCAGAGGCCCTTGGAGCTGGGGGCGGATATTGTGGTTCACAGCGGAACGAAATATCTCGGGGGACATAACGATACTTTGG
CGGGTCTTGTTGTAGTTAATGATGAAGAGCTTGCCGAAAGGATAAAACTTATTCAAAAATCGGAAGGGGCCGTACTGTCT
CCTTTTGACAGCTGGCTGATTTTAAGAGGTATAAAGACGCTGGGGGTACGCCTTGAAAAGCAGCAGGAAAATGCCATGAA
AATTGCAAAATGGCTTTGTACCCATAAAAATGTCACAAAGGTCAACTATGTGGGATTGCCCGACCATGAAGGCTATGAAA
TTTCGAAATCCCAGGCTTCCGGTTTTGGAGCCATGATTTCCTTTAACGTAAAAGACGTTCAGACTGTGGAAAAGGTTTTA
AGCAAGGTGCAGCTTGTAATGTTTGCTGAGAGCCTCGGCGGTGTGGAAAGCTTGATTACCTATCCTGCCGTTCAGACCCA
TGCTGCCATACCGGAAGAAATGAGAAATAGAATCGGGGTTACCGATACGCTTTTAAGGCTTTCGGTGGGAATTGAGGATG
CAGACGATATAATTGCCGACCTTGAGCAGGCCTTGGAATAG

Protein sequence : 
MMKVGNVSNYSISTKVVHGSKCYDPHTGAVSFPIYQSATFRHPALYQTTGYDYSRLQNPTREELENTIANIENGKFGFAF
SSGMAAVSTILSLFSPKDHIIVSDDLYGGTYRLFEEIYKKYGLEFSYVNTSRIQDIEEAVKENTKAFFIETPTNPMMKVA
DLKTISRFAKDRKILLIVDNTFLTPYFQRPLELGADIVVHSGTKYLGGHNDTLAGLVVVNDEELAERIKLIQKSEGAVLS
PFDSWLILRGIKTLGVRLEKQQENAMKIAKWLCTHKNVTKVNYVGLPDHEGYEISKSQASGFGAMISFNVKDVQTVEKVL
SKVQLVMFAESLGGVESLITYPAVQTHAAIPEEMRNRIGVTDTLLRLSVGIEDADDIIADLEQALE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-83 46
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-84 46