|
Name : Clo1313_0337 (Clo1313_0337) Accession : YP_005686879.1 Strain : Clostridium thermocellum DSM 1313 Genome accession: NC_017304 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 369701 - 370165 bp Length : 465 bp Strand : + Note : KEGG: cce:Ccel_0819 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein DNA sequence : ATGGCAAAGGAAGAAAAAAGGGTTGTAGCGCAGAATCGAAAAGCAAGGCATGACTATTTTATTGAACAGACTATTGAGGC GGGTATAGTTTTGTCAGGCACCGAAGTTAAATCAATCAGGGCCGGCAAAGTAAGCCTCAAGGACAGTTATGCCAATGTCA AAAACGGTGAAGTGTTTATATACGGCATGCATATCAGTCCCTATGAGCAGGGCAATATATTCAACAAGGACCCTTTGAGG GACAGAAAGCTTCTTTTGCACAGAGCTGAAATAAACAAGCTTATAGGTTATATTCAGCAAAAGGGAATGACTTTGGTACC GCTGGAAGTCTACTTTAAAAACGGCAAAGTGAAAATTGAGCTTGGCATAGCAAAAGGTAAGAAGCTCTATGACAAGAGAG AGGATATTGCCAAAAGGGATGCTTTAAGAGAGATTGACAGAAGGCTGAAAGAGAACTTTAGATAG Protein sequence : MAKEEKRVVAQNRKARHDYFIEQTIEAGIVLSGTEVKSIRAGKVSLKDSYANVKNGEVFIYGMHISPYEQGNIFNKDPLR DRKLLLHRAEINKLIGYIQQKGMTLVPLEVYFKNGKVKIELGIAKGKKLYDKREDIAKRDALREIDRRLKENFR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 3e-37 | 58 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 2e-33 | 55 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 1e-30 | 48 |
