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Name : Clo1313_3003 (Clo1313_3003) Accession : YP_005689432.1 Strain : Clostridium thermocellum DSM 1313 Genome accession: NC_017304 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 3517347 - 3518666 bp Length : 1320 bp Strand : - Note : KEGG: ele:Elen_1917 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase DNA sequence : ATGGGATTGTATGAAAAAATTGTTAATAAGGAAGAGAAAATTTCTGTGATTGGATTAGGCTACGTGGGAATGCCATTAGC CATTGCATTTGCTAAATATGCACAGGTAATTGGATTTGATGTGGACAAAAAAAAGATTGAAATATATAAATCAGGAATCG ATCCAACAAAAGAGATAGGGAATGAAGCTATAAAAAATACAACTGTTGAATTTACGTCCGATGAAACAAAGTTAAAAGAA GCAAAATTTCATATAGTGGCAGTTCCCACCCCGATTAATATAGATAAAACTCCGGATTTGACACCGGTTGAAAGTGCAAG TGTTATTGTGGGAAGAAATATGGCTAGAGGTTCATATGTGGTCTATGAATCAACAGTTTATCCTGGAGTAACTGAGGATA TTTGTATTCCAATACTTGAAAGAGAATCGGGACTTAAATGCGGAGTTGATTTTAAAGTTGGATATTCTCCGGAACGTATT AATCCAGGAGACAAGAAGCATACGCTGGAAACAATAAAAAAAATTGTATCTGCTATTGATGATGAAAGTTTAGATGAGAT TGCAAAAATTTATAGCCTTGTGATAAAAGCAGGAGTGCATAAGACCAGCTCGATTAAAGTTGCCGAGGCGGCTAAAGTTG TGGAAAACAGCCAAAGGGATATAAATATTGCCTTTATGAATGAACTTGCGATGGTATTTGATCGTATGGGCATTGATACG AAAGAAGTTATAGATGCCATGAATACAAAGTGGAATGCACTGGGATTTTATCCTGGTTTGGTGGGTGGACATTGCATTGG TGTGGATCCCTATTATTTTATTTATCAGGCGGAAAAGCTGGGATATCACAGTCAAATTATTCTTTCCGGAAGAAAAATTA ATGATGGAATGGGTGAATTTATAGCTAACACCATAATTAAGAAGCTTATACATGTCAATAAAGTAGTAAAAAAATCAAAA GTAGTTATTTTCGGTATTACTTATAAAGAAAATTGCCCGGATACAAGAAACTCCAAGGTTGTAGATATAATTAAAGGATT GAATGAGTATGGAATAGAACCCATAGTGGTTGATCCTCAGGCAAACAGGGAAGATACAAAACAAGAATATGGCATTGAAC TGATGGATATAGATGATGTGAAAGATGCGGACTGCCTTGTATTTGCCGTTGCCCATGATGAATTTAAAAATATGGCTTGG GAGCAGATAGAAAAATTCTTTAAAAATATTGATAATAGCGAAAAAGTAATTATTGATGTAAAGGGAATATTTGATAAAAA TAAAATCGAGAAACTAGGCTATTGCTACTGGAGGCTATGA Protein sequence : MGLYEKIVNKEEKISVIGLGYVGMPLAIAFAKYAQVIGFDVDKKKIEIYKSGIDPTKEIGNEAIKNTTVEFTSDETKLKE AKFHIVAVPTPINIDKTPDLTPVESASVIVGRNMARGSYVVYESTVYPGVTEDICIPILERESGLKCGVDFKVGYSPERI NPGDKKHTLETIKKIVSAIDDESLDEIAKIYSLVIKAGVHKTSSIKVAEAAKVVENSQRDINIAFMNELAMVFDRMGIDT KEVIDAMNTKWNALGFYPGLVGGHCIGVDPYYFIYQAEKLGYHSQIILSGRKINDGMGEFIANTIIKKLIHVNKVVKKSK VVIFGITYKENCPDTRNSKVVDIIKGLNEYGIEPIVVDPQANREDTKQEYGIELMDIDDVKDADCLVFAVAHDEFKNMAW EQIEKFFKNIDNSEKVIIDVKGIFDKNKIEKLGYCYWRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 8e-92 | 51 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 8e-92 | 51 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-102 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clo1313_3003 | YP_005689432.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 3e-92 | 51 |
