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Name : Clo1313_2997 (Clo1313_2997) Accession : YP_005689426.1 Strain : Clostridium thermocellum DSM 1313 Genome accession: NC_017304 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : - COG ID : - EC number : - Position : 3509042 - 3510886 bp Length : 1845 bp Strand : - Note : PFAM: polysaccharide biosynthesis protein CapD; KEGG: amt:Amet_0277 polysaccharide biosynthesis protein CapD DNA sequence : ATGAAACAAAAGATTAGAGCAAATGGATTAATTGCAATTGATGTGTTTTTAGTAAATATATCGCTTGTTATTGCATATCT TTTGAGGTTTGACTTAAACTATGCAAATATTCCGGAACGTTTTATCGAACCCTTGGTAAAGCTCGCCGTAATTTCAACAG TTGTTAAACTTATAACTTATGCTGTGATGAAGCTTTACAACAGTTTGTGGAAGTATGCGGGAATATATGAAGTGGTTATG GTTATAGCTGCTTCATTTATCAGCAATTCAATAATGATAAGCTATGTGTTTTTATCCCAAACGCCCGTACCTCGAAGTAT ATTCCTGATATGCATCTTGACGGATATTGCCCTGATTGGGGGAGTACGGTTTGCTTACAGGGTGTTTAGAAGAATTGTCA AAGGGGAAATGATTCGTTTTACAAATTCAAAGAGGGTGCTGATTGCAGGCGCCGGGGACGCCGGCGCGATAATTGTGAAG GAAATGAAGTCCCATCCTGAACTTAAAAGCACTCCGGTGGCGTTTGTAGATGACGATAAATACAAAATAGGCAAAAAAAT CAGCGGAGTGCCTGTGGTGGGTGAGACAAAGGATGTTTCAGAAATAATACAGAAGCTGCAGATAGACGAAGTCATTATTG CCATGCCGTCTGCCAGCCACAAAAAAATAAATGATATATACACCGGCTGTGCCCAAACAAACTGCAAGGTAAAGATACTT CCGTCGGTTTCACAGCTGATTGATGAATCTGTTGTCATGCAGAAAATAAGGGATGTGAATATAGAAGACCTTTTGGGAAG GGAACCTGTACATCTTGATATTGAAGAGATTGGTTCGTATCTGAAGGACCGGGTGGTAATGGTTACCGGGGGAGGAGGCT CAATCGGTTCGGAGCTGTGCAGGCAGATAGCGAATTTTTTGCCGAAGAGGCTTGTTATTTTGGATAATTATGAAAACAAT GCATATGACATACAGAATGAACTTTTGTACAAGCATCCGGATTTAAAGCTTGACACAGTGATTGCCAATATCAGAGAAAA ACAGAGAATGGAAAACATATTTAAAAAATACAGGCCAGACGTTGTATTTCATGCTGCGGCCCATAAACATGTCCCTCTTA TGGAGGACAATCCTACGGAGGCGATAAAAAATAATGTGTTTGGCACCTTAAATGTGGCTGAATGTGCGGACAAGTATGGA ACTAAAAGGTTTGTACTTATATCCACGGACAAGGCCGTCAACCCTACGAATATTATGGGTGCGACAAAAAGAATTGCAGA AATGATTATCCAGGCGATGAATGAAAACAGCAAAACCGAGTTTGTTGCGGTAAGGTTTGGAAACGTGCTTGGAAGCAACG GAAGTGTTGTACCACTGTTTAAAAAGCAGATAGAAAGGGGAGGACCGGTAACGGTCACCCATCCGGAAATCACCAGATTC TTTATGACAATTCCGGAGGCTGTGCAGCTGGTACTACAAGCTGGGGCAATGGCAAAGGGCGGAGAAATATTTGTTCTTGA TATGGGTGAACCTGTGAAAATAAGTGAGCTTGCCCGAAACTTGATAAGACTTTCGGGTTTTGAGCCGGATGTCGATATAA AGATTGAGTATATAGGTTTGAGACCCGGCGAAAAGCTTTATGAGGAACTTATGCTCAGTGAGGAAGGGCTTTTGGCAACC AAAAACGACAAAATATATGTTACAAAGCCTGTTCATATTGATTTTAAGGTGCTCCAGAGGGAGCTGGATTGCCTTAAGGA TATTATGGTTACAAATTCTGAAGAGATTTCAGAATATATTAAACTTATTGTGCCTACGTACAAGAAAGCGGGAAACGGAA ATTAA Protein sequence : MKQKIRANGLIAIDVFLVNISLVIAYLLRFDLNYANIPERFIEPLVKLAVISTVVKLITYAVMKLYNSLWKYAGIYEVVM VIAASFISNSIMISYVFLSQTPVPRSIFLICILTDIALIGGVRFAYRVFRRIVKGEMIRFTNSKRVLIAGAGDAGAIIVK EMKSHPELKSTPVAFVDDDKYKIGKKISGVPVVGETKDVSEIIQKLQIDEVIIAMPSASHKKINDIYTGCAQTNCKVKIL PSVSQLIDESVVMQKIRDVNIEDLLGREPVHLDIEEIGSYLKDRVVMVTGGGGSIGSELCRQIANFLPKRLVILDNYENN AYDIQNELLYKHPDLKLDTVIANIREKQRMENIFKKYRPDVVFHAAAHKHVPLMEDNPTEAIKNNVFGTLNVAECADKYG TKRFVLISTDKAVNPTNIMGATKRIAEMIIQAMNENSKTEFVAVRFGNVLGSNGSVVPLFKKQIERGGPVTVTHPEITRF FMTIPEAVQLVLQAGAMAKGGEIFVLDMGEPVKISELARNLIRLSGFEPDVDIKIEYIGLRPGEKLYEELMLSEEGLLAT KNDKIYVTKPVHIDFKVLQRELDCLKDIMVTNSEEISEYIKLIVPTYKKAGNGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-107 | 49 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 8e-100 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clo1313_2997 | YP_005689426.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 1e-103 | 44 |
| Clo1313_2997 | YP_005689426.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 2e-84 | 43 |
