Gene Information

Name : Clo1313_2850 (Clo1313_2850)
Accession : YP_005689281.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3345913 - 3346329 bp
Length : 417 bp
Strand : -
Note : KEGG: cce:Ccel_0056 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n

DNA sequence :
ATGAACAAGGTTATTTTAATGGGAAGACTCACCAGAGACCCTGAGCTTAGATATACAACTGTCAACAATACTCCTGTGGC
AAGCTTTACACTGGCGGTCGACCGGCGTTTTGCACGGCAGGGGGAGGAAAGGCAGACGGATTTTTTCCCTATTGTGGCCT
GGGACAAAAGCGCAGAATTTTGCTCAAAGTATTTTACGAAGGGTCTTAAGGTGGTAGTTGTTGGAAGATTGCAGACTCGT
ACGTGGGATGATAATGAAGGAAAACGGCATTATGTAACCGAAGTGATTGCGGAAGAATTATATTTTGCCGAGGGCAAAAA
GAGCCAGGGAATGGAAGATATAAAGCCTGCAGCGGAAATTGCGGAGCCGACGGATGGATTTTATCCTTTGGACGATGATG
ACGAACTTCCATTCTGA

Protein sequence :
MNKVILMGRLTRDPELRYTTVNNTPVASFTLAVDRRFARQGEERQTDFFPIVAWDKSAEFCSKYFTKGLKVVVVGRLQTR
TWDDNEGKRHYVTEVIAEELYFAEGKKSQGMEDIKPAAEIAEPTDGFYPLDDDDELPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 3e-22 54
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 3e-22 54
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 5e-22 53
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 7e-22 53
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 5e-22 53
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 1e-21 51
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 2e-20 49
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 1e-18 48
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 8e-20 47
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 3e-17 45
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 6e-23 43
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 5e-21 42