Gene Information

Name : Clo1313_2700 (Clo1313_2700)
Accession : YP_005689136.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3178058 - 3179209 bp
Length : 1152 bp
Strand : +
Note : PFAM: Integrase catalytic region; transposase IS3/IS911 family protein; KEGG: cce:Ccel_2178 transposase IS3/IS911 family protein

DNA sequence :
ATGGAAAAGAGAAAACATTTTACACCTGAACAAAAAGCAAAAATAGTGATTGAGGTCATCAAGGGAGAAAGAACGCTGAA
TGAGATTGCTGCAGAATATGGAATTCATCCAAACCTGTTAAGTCGCTGGAAGACTGAATTCATAAGCAATGCGGGCAGAG
TATTCAGCAAGGAAACTGATGAAGTAGAGAAGGTCAAACAGTCGTATGAAAAGGAGAAGGACGAACTGCTTAAGCAAATT
GGTCAACTATCATATGAGGTTGCCTGGCTTAAAAAAAATCTGGCCTCCTCTAAATCCCGAGAAGACCGCATGAAAATGAT
TGATAGAAATGAGAAGAAACTCAGCATAACAAGGCAAGCAGAATTATTGAGCTTAAACCGTACGAGCGTTTACTACAAGC
CTGCTCCGGTAAATGAGGAGGAATACCTGATTAAGCGTATCATTGATGAAATTTACGCGTCTTATCCGGAATATGGCTAT
CGCAGGATGACAAGTATATTGAACAAGGATTATCACATTCATATCAATCGAAAACGGACCCGGCGTTATATGAGGGAAAT
GGGCATACATGGATTCTGTCCTGGCCCCAACCTCAGCAAACGAATACATGGTAAGAATTTGTATCCATATCTGTTGAGAA
ACTTGAAAATTGATCATCCTAATCAGGTATGGTCCATAGATGTGACCTATTGCCGAATGAAACGCGGTTTCATGTATATG
GTTGCAATAATAGACTGGTATTCTCGGTATATTGTTGGGTTTGAACTATCAAACACTCTTGATAAGACATTCGTCATAGA
AGCAATCCAAAAGGCCATAAAGCGATATGGCAAGCCTGAAATCATGAACAGTGATCAAGGCTCACAGTTTACCAGTGATG
ATTACATAAATCTATTAAAAAATAACGGTATCAAAATATCTATGGATGGAAAAGGAAGAGCATTAGACAACCAAAGGATA
GAACGATTTTTCCGTTCCTACAAGTGGGAGAAACTTTATCTTGAAGAGTGCGAAACGGTACAACAACTTAGACAAATCAC
AAAGGAATATGTGGAGCACTATAACCATAGGAGACCGCACCAGTCATTGGATTACAAAACACCGGCAGAGTATTACTTTG
GAGGATATGACCAGCTACTGGCAGTTGTATAG

Protein sequence :
MEKRKHFTPEQKAKIVIEVIKGERTLNEIAAEYGIHPNLLSRWKTEFISNAGRVFSKETDEVEKVKQSYEKEKDELLKQI
GQLSYEVAWLKKNLASSKSREDRMKMIDRNEKKLSITRQAELLSLNRTSVYYKPAPVNEEEYLIKRIIDEIYASYPEYGY
RRMTSILNKDYHIHINRKRTRRYMREMGIHGFCPGPNLSKRIHGKNLYPYLLRNLKIDHPNQVWSIDVTYCRMKRGFMYM
VAIIDWYSRYIVGFELSNTLDKTFVIEAIQKAIKRYGKPEIMNSDQGSQFTSDDYINLLKNNGIKISMDGKGRALDNQRI
ERFFRSYKWEKLYLEECETVQQLRQITKEYVEHYNHRRPHQSLDYKTPAEYYFGGYDQLLAVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACF06170.1 putative transposase Not tested Tn5036-like Protein 4e-54 45