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Name : Clo1313_2609 (Clo1313_2609) Accession : YP_005689060.1 Strain : Clostridium thermocellum DSM 1313 Genome accession: NC_017304 Putative virulence/resistance : Resistance Product : D-alanine--D-alanine ligase Function : - COG functional category : - COG ID : - EC number : 6.3.2.4 Position : 3074441 - 3075571 bp Length : 1131 bp Strand : - Note : TIGRFAM: D-alanine/D-alanine ligase; KEGG: cce:Ccel_0283 D-alanyl-alanine synthetase A; PFAM: D-alanine--D-alanine ligase domain protein DNA sequence : ATGGGCGATAAAAAAAGAGTACTGGTTATTTTTGGCGGACAATCGTCGGAACACGAAGTTTCAAGAATATCGGCAACATC CATACTGAAGAACATTAATTTGGATAAATTCGATGTTTCAATGATAGGAATCACAAAAGACGGAAAGTGGCTTTATTATG ACGGGCCTATTGATAAAATTCCTTCCGGAGAGTGGGAGGAAATCGCACTGAAAGATGGGACAAGAAGTATTGCCGACAGA GTGAGCCTGTTCGACAACATAATAAGTTGCAAAAATAACGCATGCGGCCTTGAAAAGGCCTCAGAGAACGAAAAAAGCAA AAAGATAGATGTGGTTTTTCCGGTTCTGCACGGCTGCAACGGTGAAGACGGGACCATCCAGGGACTTTTTGAACTGGCGG GCATTCCTTATGTGGGCTGCGGTGTGCTGGCTTCAGCAGTCGGAATGGATAAGATTTATGCAAAGATAATTTTTGAAAAA GCCGGAATACCCCAGGCGGATTATCTGTATTTCACAAGAAAAGAAATTTACGGGGATGTTGAGGGTGTGGTTGACAAAAT AGAGGAGAAATTTTCATATCCTGTATTTGTAAAACCGTCCAATGCCGGTTCTTCCGTAGGTGTGTCAAAGGCGCATGATA AAAATGAGCTTAAAGAGGCATTGATTTATGCCGCCAGGTATGATAGAAAAGTACTGATTGAGGAATTTATCAACGGAAGA GAAGTTGAGTGTGCCGTGCTGGGGAATGATGATCCTGTGGCATCAACGGTGGGAGAAATCATTCCGGGAAATGAATTTTA CGACTACAAGGCAAAATACATTGACAATACTTCCAAAATAAAAATTCCCGCGGATCTTCCAGAAGAGACCGTGGAACAAA TAAGAAATTATGCAGTAAAGGCATTCAAGGCTTTGGATTGTTCGGGACTTGCAAGAGTTGACTTTTTTGTGCACAAGGAA ACCGGAAAAGTTTATATAAATGAAATTAATACAATGCCGGGATTTACAAGTATAAGCATGTATCCCATGCTTTGGGAGGA ATCCGGCATTTCCTATCCGGAACTTATTGAAAAGCTGATTGACTTGGCTGTTCAAAGATACAATGACAATCTCAAAGAAT ATGATGAGTAG Protein sequence : MGDKKRVLVIFGGQSSEHEVSRISATSILKNINLDKFDVSMIGITKDGKWLYYDGPIDKIPSGEWEEIALKDGTRSIADR VSLFDNIISCKNNACGLEKASENEKSKKIDVVFPVLHGCNGEDGTIQGLFELAGIPYVGCGVLASAVGMDKIYAKIIFEK AGIPQADYLYFTRKEIYGDVEGVVDKIEEKFSYPVFVKPSNAGSSVGVSKAHDKNELKEALIYAARYDRKVLIEEFINGR EVECAVLGNDDPVASTVGEIIPGNEFYDYKAKYIDNTSKIKIPADLPEETVEQIRNYAVKAFKALDCSGLARVDFFVHKE TGKVYINEINTMPGFTSISMYPMLWEESGISYPELIEKLIDLAVQRYNDNLKEYDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vanB | NP_815951.1 | D-alanine--D-lactate ligase | Not tested | Not named | Protein | 7e-55 | 42 |
| vanB | YP_008394259.1 | Vancomycin B-type resistance protein vanB, D-alanine--D-lactate ligase | Not tested | Not named | Protein | 4e-54 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clo1313_2609 | YP_005689060.1 | D-alanine--D-alanine ligase | AE016830.1.gene2250. | Protein | 3e-55 | 42 |
| Clo1313_2609 | YP_005689060.1 | D-alanine--D-alanine ligase | U00456.gene.p01 | Protein | 3e-55 | 42 |
| Clo1313_2609 | YP_005689060.1 | D-alanine--D-alanine ligase | U35369.1.gene6.p01 | Protein | 3e-55 | 42 |
| Clo1313_2609 | YP_005689060.1 | D-alanine--D-alanine ligase | AY145441.gene.p01 | Protein | 9e-55 | 41 |
