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Name : Clo1313_2490 (Clo1313_2490) Accession : YP_005688952.1 Strain : Clostridium thermocellum DSM 1313 Genome accession: NC_017304 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : - COG ID : - EC number : - Position : 2913076 - 2914794 bp Length : 1719 bp Strand : - Note : KEGG: tjr:TherJR_0607 urease, alpha subunit; TIGRFAM: urease, alpha subunit; PFAM: amidohydrolase; Urease alpha-subunit domain-containing protein DNA sequence : ATGAGTGTAAAAATAAGCGGCAAAGATTATGCCGGTATGTATGGCCCGACAAAAGGCGACAGGGTGAGGCTGGCAGACAC GGATCTCATTATTGAGATTGAGGAAGATTACACGGTTTATGGAGATGAGTGCAAATTCGGAGGAGGTAAATCCATAAGGG ACGGAATGGGCCAGTCTCCTTCGGCTGCAAGAGATGACAAGGTTTTGGATTTGGTAATTACCAATGCCATAATCTTTGAC ACATGGGGGATTGTAAAGGGAGATATAGGTATAAAAGACGGAAAAATAGCCGGAATCGGGAAGGCGGGAAATCCGAAAGT AATGAGCGGCGTGTCGGAGGATTTAATAATCGGGGCCTCTACCGAAGTTATTGCCGGAGAAGGACTTATTGTGACTCCGG GAGGAATTGATACACATATACATTTTATATGCCCCCAGCAGATTGAGACCGCATTGTTCAGCGGTATCACAACAATGATT GGTGGCGGAACGGGACCGGCAGACGGAACCAATGCCACCACTTGCACACCGGGAGCCTTTAACATCCGGAAAATGTTAGA GGCGGCAGAGGACTTTCCGGTAAATTTAGGTTTTTTGGGGAAAGGGAATGCTTCTTTTGAGACTCCTCTGATAGAACAGA TTGAAGCAGGGGCGATTGGCTTAAAGCTCCATGAGGATTGGGGAACCACACCCAAGGCTATAGATACATGCCTGAAAGTT GCGGATCTTTTTGATGTACAGGTGGCTATACATACCGATACACTGAACGAGGCAGGATTTGTAGAGAATACTATAGCGGC TATAGCCGGAAGGACAATTCACACTTACCATACCGAGGGAGCGGGCGGCGGGCACGCACCGGACATAATTAAAATTGCAT CACGCATGAATGTACTGCCCTCGTCTACCAATCCCACCATGCCTTTTACCGTCAATACATTGGATGAACATCTCGATATG CTTATGGTATGCCATCATCTTGACAGCAAGGTAAAAGAGGACGTTGCTTTTGCCGATTCGAGGATCCGGCCTGAGACAAT AGCCGCAGAAGACATACTGCACGATATGGGAGTATTCAGCATGATGAGTTCAGATTCCCAGGCCATGGGACGCGTGGGAG AGGTTATTATAAGGACCTGGCAGACTGCACATAAAATGAAGCTTCAAAGAGGTGCCCTGCCGGGGGAAAAGAGCGGCTGT GACAATATAAGGGCTAAAAGATACCTTGCCAAGTATACCATAAACCCTGCTATAACCCATGGAATTTCACAGTATGTGGG CTCCCTGGAGAAAGGGAAAATAGCCGACTTGGTCCTCTGGAAGCCTGCAATGTTTGGTGTAAAGCCTGAAATGATTATTA AGGGCGGCTTTATAATAGCCGGCAGGATGGGCGATGCAAATGCGTCCATACCCACACCTCAGCCTGTAATATATAAAAAC ATGTTCGGTGCCTTCGGAAAGGCAAAGTACGGAACCTGTGTGACTTTTGTTTCAAAGGCTTCGCTGGAAAATGGCGTTGT GGAAAAGATGGGGCTTCAAAGAAAAGTGCTTCCGGTCCAGGGATGCAGGAATATCTCAAAAAAATATATGGTACACAACA ATGCAACGCCTGAAATTGAAGTTGATCCTGAAACCTATGAGGTAAAGGTGGACGGTGAGATTATCACCTGCGAACCATTA AAGGTCTTACCCATGGCGCAGAGATATTTCTTGTTTTAA Protein sequence : MSVKISGKDYAGMYGPTKGDRVRLADTDLIIEIEEDYTVYGDECKFGGGKSIRDGMGQSPSAARDDKVLDLVITNAIIFD TWGIVKGDIGIKDGKIAGIGKAGNPKVMSGVSEDLIIGASTEVIAGEGLIVTPGGIDTHIHFICPQQIETALFSGITTMI GGGTGPADGTNATTCTPGAFNIRKMLEAAEDFPVNLGFLGKGNASFETPLIEQIEAGAIGLKLHEDWGTTPKAIDTCLKV ADLFDVQVAIHTDTLNEAGFVENTIAAIAGRTIHTYHTEGAGGGHAPDIIKIASRMNVLPSSTNPTMPFTVNTLDEHLDM LMVCHHLDSKVKEDVAFADSRIRPETIAAEDILHDMGVFSMMSSDSQAMGRVGEVIIRTWQTAHKMKLQRGALPGEKSGC DNIRAKRYLAKYTINPAITHGISQYVGSLEKGKIADLVLWKPAMFGVKPEMIIKGGFIIAGRMGDANASIPTPQPVIYKN MFGAFGKAKYGTCVTFVSKASLENGVVEKMGLQRKVLPVQGCRNISKKYMVHNNATPEIEVDPETYEVKVDGEIITCEPL KVLPMAQRYFLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 4e-163 | 65 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 4e-163 | 65 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 3e-155 | 64 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 3e-155 | 64 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 3e-155 | 64 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 5e-155 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clo1313_2490 | YP_005688952.1 | urease subunit alpha | VFG0270 | Protein | 1e-170 | 69 |
