Gene Information

Name : Clo1313_0242 (Clo1313_0242)
Accession : YP_005686787.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Unknown
Product : capsular exopolysaccharide family protein
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.10.2
Position : 265446 - 266195 bp
Length : 750 bp
Strand : +
Note : KEGG: clj:CLJU_c05160 putative exopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family

DNA sequence :
TTGTCGGAAATCAGCTATGTAATTAAATATGATTTAAACCAAACGGTTGAGGAAGCATATAATGTTTTAAGAGCAAATAT
TCAATTTTGTGAATCTGACAAAAAAATTAAAACCATAGCCGTGACAAGCTACAGTCCAGGCGAGGGAAAATCAACGACGT
CAATAAACCTCGGGATTTCAATGGCTAAATCAGGGATGAAGGTTTTATACGTTGATGCCGACATACGAAAACCAATGCCT
TTCAAATATTTTATGAGTACCAATTTAAAAGGTCTTACCAATTATATACTGGGCCAGGCGAAGCTGGAGGAGGTAATAAA
CAAGACCGACATTGAGGGATTTGATTTTATAAGCTGCGGAGTTAAAACCAACAATCCGGTGGAACTTATATCATCAAACA
AATTCAGCAGCTTTGTCAGTGAAGTAAGAGAGACTTATGATATGGTTATTATCGATACCCCGCCTCTGGGGAGTGTTATT
GATGCGGCATTGATTGCATCTCACGTGGACGGGACAATTATTGTTATTGAGGCAAATGTGGTAAAGTGCCAGAATGCTTT
GAGGATGAAAGAACAGCTTGTAAGGGCCAATGCCAATATATTGGGGGTCGTTTTAAACAAAATAAGCAAGTCGGAGTATA
AAAACTACTATGGCAGCTATGACTATTACAATTCCAAAAAGAAATACATTAAGAAGTGGTCGCAGTTAATCAAGAATTTA
AAGAATTTAAAGAGGGGAGAACATGATTGA

Protein sequence :
MSEISYVIKYDLNQTVEEAYNVLRANIQFCESDKKIKTIAVTSYSPGEGKSTTSINLGISMAKSGMKVLYVDADIRKPMP
FKYFMSTNLKGLTNYILGQAKLEEVINKTDIEGFDFISCGVKTNNPVELISSNKFSSFVSEVRETYDMVIIDTPPLGSVI
DAALIASHVDGTIIVIEANVVKCQNALRMKEQLVRANANILGVVLNKISKSEYKNYYGSYDYYNSKKKYIKKWSQLIKNL
KNLKRGEHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpsFD YP_006310771.1 putative autophosphorylating protein tyrosine kinase Not tested FWisland_4 Protein 2e-28 41