Gene Information

Name : Clo1313_2377 (Clo1313_2377)
Accession : YP_005688845.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Unknown
Product : recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2791895 - 2792350 bp
Length : 456 bp
Strand : -
Note : PFAM: Recombinase; KEGG: ckr:CKR_2322 hypothetical protein

DNA sequence :
ATGAGCCATATACCTTTTGGATATACCATTCAGAACGGTAGGGCTGTAATTAATGAAGAGGAAGCAGTTAAGATTGAGAA
ACTATTTGAGGCTTACCTTTCCGGTCTTTCTTTAACCGAAGCAGCCCAAAAAGCGGGCATTAAGCGCTACCACACATCTA
TTGCAAGAATGCTGGCAGATAAACGGTATGTTGAGGACAAATTTTATCCGCCAATTATCAGCAAGGACACATTTGAAAAA
GCACAACTGGAAAGACGCAGGCGAGCTGAGGCGCTTGGCAGGATTTATGAACATAAAGGAAATGAAAAGAAATGCCTGAA
TTTTAAGTTTCATGCTTCAATGCCAGATAATCTATACGATGATCCATTTCAGCAGGCAGAGTATGCTTATAGTCTTATTA
AGAGCGAGGTGATTTTAGATGACAACCAGGAATGTTACGGTAATTCCTGCCCGTAA

Protein sequence :
MSHIPFGYTIQNGRAVINEEEAVKIEKLFEAYLSGLSLTEAAQKAGIKRYHTSIARMLADKRYVEDKFYPPIISKDTFEK
AQLERRRRAEALGRIYEHKGNEKKCLNFKFHASMPDNLYDDPFQQAEYAYSLIKSEVILDDNQECYGNSCP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smi_1714 YP_003446816.1 hypothetical protein Not tested The aminoglycoside resistance gene cluster Protein 2e-28 54
SSU98_0959 YP_001200517.1 recombinase Not tested 89K Protein 2e-18 42
SSU05_0952 YP_001198318.1 recombinase Not tested 89K Protein 2e-18 42