Gene Information

Name : Clo1313_2376 (Clo1313_2376)
Accession : YP_005688844.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Unknown
Product : resolvase domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2790364 - 2791932 bp
Length : 1569 bp
Strand : -
Note : KEGG: pmo:Pmob_0430 resolvase domain-containing protein; PFAM: Resolvase domain; Recombinase; SMART: Resolvase domain

DNA sequence :
ATGACAACCAGGAATGTTACGGTAATTCCTGCCCGTAAGCGAATTGGGAATAGTGCAAATGCCGAGGAATTACCTAAGCT
TCGGGTAGCAGCTTACTGTCGTGTTTCTACGGACAGCGAGGAGCAGGCAACCAGTTATGAAGCGCAAATTGAGCACTACA
CAAACTACATCAAAAGCAATCCAGAATGGGAGTTAGCCGGTATATTTGCAGATGAAGGTATTACCGGAACTAACACAAAA
AAGCGTGAAGAATTTAACCGGATGATAGAAGAATGCATGCAGGGTAAAATCGATATGATAATTACGAAATCTATCAGCCG
GTTTGCAAGAAATACGCTGGACTGCCTAAAGTACATAAGGCAGCTTAAAGAAAAAAATATTCCGGTTTACTTTGAAAAGG
AAAATATAAACACGCTGGATTCCAAAGGAGAAATCCTGTTGACCATTATGGCATCTTTGGCACAGCAAGAAAGCCAATCG
TTAAGCCAGAATGTAAAACTGGGTATTCAGTACCGATATCAGCAAGGAAAAATTCATATCAATCACAACCGGTTTCTTGG
CTATACAAAGGATAAGGATGGCAACTTAGTTATCGTACCTGAAGAAGCTGAGATCGTTAAACGCATTTACAAAGAATACC
TCGAAGGTTCCAGTATGCTGCAGATAGCAAGAGGTTTGGAAGCTGACGGAATACTTACGGGTGCAGGCAATCCAAGATGG
CATACCAGCACAATCAATAAGATTTTGAGGAATGAAAAATATATCGGTGATGCACTGCTGCAGAAAACATATACTGTAGA
TTTTTTATCGAAGAAAAGGGTACCCAATAATGGTATTGTTCCGCAATACTATGTAGAAAACAGCCATGAGCCTATAATCC
CACGTGAAATTTTTATGCAGGTTCAGGAACAGCTTGTTAAAAGAAGATGTGTGCATATAAGTAAGAACGGAAAGAAGAGA
AACTATAGCAACAATCATCCTTTATCACAGATGGTTTTCTGCGGCAATTGCCATGAAATATTCCGCAGGGTACATTGGAA
TAATCGAGGGAAGAAATCAATTGTATGGAGATGTGTTAGCCGGTTAGAAAATACCGGTTTGTTTTGTACCGCTTCCACTA
TACTTGAAGATACGCTTAAAGAGAAAATTGTAGAAGCCATCAATGTAGCGGTCAGCGGAAAAAACTCTTTTCTGGCCATA
CTGAAGAAGAATATTGAAACCGTATTAAGCGTGGATTTGGATGAGACTACAGCAGACATTGATAAAAGGCTAGAAGAACT
CCAAACCGAGTTAATCCAAAAGGCAAATTCAAAGGAAGCATATGATAATATTGTCAATGAGATTTACCGCTTGCGGGACT
TAAGGCAAGAAACACTTTCGAGAAACGCTCTCCGCCAAGATAAGCGGGATCGGATTGCTGAGATGACGGACTTCCTTAAC
ACGCAAACCGGTGATATTACGGAGTTTGATGATAAACTGGTTAGAAAACTAGTTGAAAAAGCAATTGCATATGATGACAG
GATAGTGGTTGAGTTTAAGTCTGGGTTAGAAATAGAAGTGAATCTATAG

Protein sequence :
MTTRNVTVIPARKRIGNSANAEELPKLRVAAYCRVSTDSEEQATSYEAQIEHYTNYIKSNPEWELAGIFADEGITGTNTK
KREEFNRMIEECMQGKIDMIITKSISRFARNTLDCLKYIRQLKEKNIPVYFEKENINTLDSKGEILLTIMASLAQQESQS
LSQNVKLGIQYRYQQGKIHINHNRFLGYTKDKDGNLVIVPEEAEIVKRIYKEYLEGSSMLQIARGLEADGILTGAGNPRW
HTSTINKILRNEKYIGDALLQKTYTVDFLSKKRVPNNGIVPQYYVENSHEPIIPREIFMQVQEQLVKRRCVHISKNGKKR
NYSNNHPLSQMVFCGNCHEIFRRVHWNNRGKKSIVWRCVSRLENTGLFCTASTILEDTLKEKIVEAINVAVSGKNSFLAI
LKKNIETVLSVDLDETTADIDKRLEELQTELIQKANSKEAYDNIVNEIYRLRDLRQETLSRNALRQDKRDRIAEMTDFLN
TQTGDITEFDDKLVRKLVEKAIAYDDRIVVEFKSGLEIEVNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smi_1713 YP_003446815.1 site-specific recombinase Not tested The aminoglycoside resistance gene cluster Protein 0.0 71
SSU05_0953 YP_001198319.1 DNA recombinase Not tested 89K Protein 9e-155 60
SSU98_0960 YP_001200518.1 DNA recombinase Not tested 89K Protein 9e-155 60