Gene Information

Name : Clo1313_2338 (Clo1313_2338)
Accession : YP_005688811.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2746103 - 2746906 bp
Length : 804 bp
Strand : +
Note : KEGG: ckr:CKR_1909 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAGCAAAAACTTATCGGTAATCAGTGATATTATTTTACATATAGAAAATGTAAATTACACTTATTATGACGACGCCGG
AAACCATGTTGAGGTACTTCGGGATATCAATTTGTCCGTCCGCCGGGGAGAATTCCTTTCCATCATAGGTTCCTCCGGTT
GCGGAAAGACGACGCTCTTACGGCTTATAGCAGGTCTTGACAAGCCGGAAACAGGAACCCTGATTCTTAACGGAGAGCAA
ATCTCCGGACCAGATCCAGAGCGGGGCTACGTTTTTCAGCATGGAGGTCTTTTTCAATGGCTGACTGTTGAGAAAAATAT
CGCAACCGGACTTAAGGCACGCCATGTTTATAGGGAGAATAAACACCGTATTGCCCATTATATAGACCTGATTGGACTTA
AGGGGTTTGAAAAATGTTACCCGCATCAGTTAAGCGGAGGTATGGCTCAGAGAGTTGCTATTGCCAGGGCATTGATCAAT
AATCCAAAGGTACTGCTTCTTGATGAACCCATGAGTGCCTTAGATTCCTTTACCCGTTCCGATATTCAGGATAAATTGCT
TGAGCTTCATAAAGAAAATAAAACGACAATGATTCTGGTAACCCACGATGTGGACGAAGCAATCTATCTTTCCGACCGTA
TTGTGGTTATGACTCCGCGGCCCGGAAAAATCAGTGAGATCATGGAGATTAATCTCCCACATCCTCGGCATCGTGGAGGA
ACCAAATTTCTTTCCCTTCGACGGAATATATTAGAAAAACTGCATCTGGCAAGTGCGCTGCCACAGCCGGAATATACCAT
ATAG

Protein sequence : 
MSKNLSVISDIILHIENVNYTYYDDAGNHVEVLRDINLSVRRGEFLSIIGSSGCGKTTLLRLIAGLDKPETGTLILNGEQ
ISGPDPERGYVFQHGGLFQWLTVEKNIATGLKARHVYRENKHRIAHYIDLIGLKGFEKCYPHQLSGGMAQRVAIARALIN
NPKVLLLDEPMSALDSFTRSDIQDKLLELHKENKTTMILVTHDVDEAIYLSDRIVVMTPRPGKISEIMEINLPHPRHRGG
TKFLSLRRNILEKLHLASALPQPEYTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-53 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clo1313_2338 YP_005688811.1 ABC transporter BAC0162 Protein 1e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clo1313_2338 YP_005688811.1 ABC transporter VFG0344 Protein 1e-33 41