Gene Information

Name : Clo1313_2323 (Clo1313_2323)
Accession : YP_005688796.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2731192 - 2732013 bp
Length : 822 bp
Strand : -
Note : KEGG: ckr:CKR_0738 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGTCAAAACTGACGCTGTGCGAAATGGGTGTTATGGATGATTATATTCAGATTTCGGGCTTACATAAAACCTTCCACAC
ACGCAGCGGCCCGATTCAAGTACTTAAGGGAATTGATTTAACGGTGCGGAAGGGTGAGATATTTGGGATTATAGGATTCA
GCGGCGCAGGGAAATCCACACTTGCCCGATGCATCAACCGGCTTGAAACACCGGATTCAGGCAGTATCAAAGTGGGAGGT
GTTGAAATACTCAACCTTTCAAAAAAGCAGCTGCTGCAAGAGAGAAAAAAGATTGGCATGATTTTTCAAACCTTTAATTT
GTTTGAAGCCAAAACCGTTTATCATAACATTTCCTACCCGCTGGAAATAAGCAAAATCCCGAAACCGGAAATTCGCAAGA
GAGTTCTGGAAACAGCCGAACTTGTCGGTTTGTCCGATAAGCTGAATGCTTACCCGGGAGGATTATCCGGAGGTCAAAAG
CAACGTGTAGGAATTGCCCGGGCATTGGTTAGCCGTCCGAATCTTTTGATAAGCGATGAAGCAACCTCTGCCCTTGATCC
TCAGACTACTCTGCAAATTCTGGATTTACTTAAAGAAATTAATCGAACTACCGGTATTACCATTTTAATGATTACCCACG
AACTGGATGCCATTCGATATACCTGTGATCGGATGGCTGTTCTGGAAGACGGTAAAATCATTGAAGTGGGAACCGTTCGG
GAAATTTTTAACAACCCCCTTAGCCGTACTGGAGCCCTGTTCACTAAGGTATTTACCGAATTTCAGCGGATAACGGAATT
TGAAAACGGTAGTGGTATTTAA

Protein sequence :
MSKLTLCEMGVMDDYIQISGLHKTFHTRSGPIQVLKGIDLTVRKGEIFGIIGFSGAGKSTLARCINRLETPDSGSIKVGG
VEILNLSKKQLLQERKKIGMIFQTFNLFEAKTVYHNISYPLEISKIPKPEIRKRVLETAELVGLSDKLNAYPGGLSGGQK
QRVGIARALVSRPNLLISDEATSALDPQTTLQILDLLKEINRTTGITILMITHELDAIRYTCDRMAVLEDGKIIEVGTVR
EIFNNPLSRTGALFTKVFTEFQRITEFENGSGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 9e-58 52
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 2e-58 52
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-26 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-29 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-29 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-29 43