Gene Information

Name : Clo1313_2292 (Clo1313_2292)
Accession : YP_005688772.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2700875 - 2701639 bp
Length : 765 bp
Strand : -
Note : KEGG: clj:CLJU_c14420 putative ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGGAAGCAGTACTTGAAGCAAAGAACCTGAGGAAGGAATATGGTTCAAAGGGAATGGCTTTTACGGCTTTGGACGGTAT
TGACTTAAAAGTATACAAAGGGGAATTCCTGGGAATAATGGGTCCGTCAGGAGCAGGCAAAACCACCTTGCTAAATATCC
TGTCTACAATCGACAGACCTACATCAGGCAATATTTTTTATGATGGCAGGGATGTTTTAACTATGAAAAACAGGGAACTT
TCATTGTTCAGAAGAAACAAGATCGGATTTTTGTTTCAGGACTTCAATCTTTTGGACAATATGTCGGTTGAAGATAACAT
AGCGTTGCCCCTCGCACTTTCAAATGTAAATGTAAAGGAAATAAAAGAAAAGGTGGAAAAGTTAAGTGAGTTCTTTGGAT
TAAAGGAACATCTTAAGAAATACCCTTATCAGCTGTCAGGGGGGCAAAAGCAAAGAGCGGCCGCAGCCAGAGCACTTATC
ACATCGCCGTCCATAGTTTTTGCTGATGAACCTACAGGAGCGTTGGATTCCAAATCTTCGCAGGAATTATTGCAATGCCT
TTTGAGGATGAATGAGGAATTGAATGCAACTATAATAATGGTTACCCATGATGCTTTTGCAGCCAGTTACTGCAAAAGAA
TTTTATACCTGAAGGATGGAAAAATCCATGCAAGATTGGATAAAGACTCGACCAGAAAAGAGTTCTTTAAAAGAATTATC
GACTTTGTCGGAACTATGGGAGGTGGCGTGGGTGAACTCATTTAA

Protein sequence : 
MEAVLEAKNLRKEYGSKGMAFTALDGIDLKVYKGEFLGIMGPSGAGKTTLLNILSTIDRPTSGNIFYDGRDVLTMKNREL
SLFRRNKIGFLFQDFNLLDNMSVEDNIALPLALSNVNVKEIKEKVEKLSEFFGLKEHLKKYPYQLSGGQKQRAAAARALI
TSPSIVFADEPTGALDSKSSQELLQCLLRMNEELNATIIMVTHDAFAASYCKRILYLKDGKIHARLDKDSTRKEFFKRII
DFVGTMGGGVGELI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-29 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clo1313_2292 YP_005688772.1 ABC transporter CP001581.1.gene798.p Protein 2e-34 46
Clo1313_2292 YP_005688772.1 ABC transporter CP001581.1.gene598.p Protein 5e-35 42
Clo1313_2292 YP_005688772.1 ABC transporter NC_008702.1.4606598. Protein 6e-28 42
Clo1313_2292 YP_005688772.1 ABC transporter NC_012469.1.7686878. Protein 6e-34 41