Gene Information

Name : Clo1313_0228 (Clo1313_0228)
Accession : YP_005686773.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Virulence
Product : acylneuraminate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 251590 - 252282 bp
Length : 693 bp
Strand : -
Note : PFAM: acylneuraminate cytidylyltransferase; KEGG: tnp:Tnap_0416 acylneuraminate cytidylyltransferase

DNA sequence :
ATGAAAAACATGGCAATCATTCCTGCAAGAGCCGGTTCCAAAGGCTTAAAAGATAAAAATATAAAACTGCTTAACGGAAA
ACCCATGTTGGCATATACAATTGAAGCGGCAAAAGAATCCGGTTTGTTTGAGGAAATAATGGTATCCACCGATTCGGAAA
AATATGCGGAGATTGCAAAGCAATGGGGGGCCAGCGTTCCCTTTTTAAGGCCCGTTGAACTTTCCAATGATACGGCATCA
TCATGGGATGTGGTTAAATACGTTATAGAAAAATACAAAGAACTGGGCCGGGAATTTGACACAGTGGCTCTGCTTCAGCC
AACCTCTCCTTTAAGAAACTCTGCTGATATTATTAAAGGGTACGAAATCATGAAGGAAAAGCATGCAAATTCTGTAATAG
CAGTGTGTGAAGCGGAACATTCACCGTTATGGATGAACATTTTGCCTGAAAACCATTCCATGGCCGGTTTTATAAGGCCC
GATGCTGCCAATGTCCCAAGGCAAAGCATCCCCACCTATTACAGGATTAACGGTGCTTTATACATTGTCAAGGTTGAATA
TTTAATGAATTCCAATGATATTTACTCTGACAAAAGCTATGCACTGATTATGGATAAAGAAAATTCAATTGATATTGACG
ATATGTTTGATTTTAAGATTGCAAGTCTAATATTAAGAGACAGGAAACAGTAA

Protein sequence :
MKNMAIIPARAGSKGLKDKNIKLLNGKPMLAYTIEAAKESGLFEEIMVSTDSEKYAEIAKQWGASVPFLRPVELSNDTAS
SWDVVKYVIEKYKELGREFDTVALLQPTSPLRNSADIIKGYEIMKEKHANSVIAVCEAEHSPLWMNILPENHSMAGFIRP
DAANVPRQSIPTYYRINGALYIVKVEYLMNSNDIYSDKSYALIMDKENSIDIDDMFDFKIASLILRDRKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
siaB NP_273133.1 polysialic acid capsule biosynthesis protein SiaB Not tested IHT-A Protein 1e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clo1313_0228 YP_005686773.1 acylneuraminate cytidylyltransferase VFG0253 Protein 4e-27 41