Gene Information

Name : Clo1313_1984 (Clo1313_1984)
Accession : YP_005688482.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Resistance
Product : ArsR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2336577 - 2336954 bp
Length : 378 bp
Strand : +
Note : KEGG: aoe:Clos_1085 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR

DNA sequence :
TTGGATGAAAAACGAGATTCATGTGAATGTAATGTAATACACGAAGACATAGTAAACAAAGTGAAAAAAAACATGCCCAA
AGAAGAGCACCTTTATGATCTGGCAGAGCTTTTCAAAGTTTTTGGAGATACCACCAGGATAAAAATACTATACGCATTGT
TTGCCTCTGAAATGTGTGTGTGCGATATTGCCGCACTTATAAACATGACTCAGTCGGCAGTTTCCCACCAGCTGAGAGTA
TTAAAGCAGGCAAGACTTGTAAAGTACAGAAAAGAAGGCAAAGTCGTGTACTACTCTTTGGATGACGACCATATAAAACA
AATATTTGACCAAGGCTATATGCATATAACGGAAAATGAATCCGGAAAGCAGGTGTAA

Protein sequence :
MDEKRDSCECNVIHEDIVNKVKKNMPKEEHLYDLAELFKVFGDTTRIKILYALFASEMCVCDIAALINMTQSAVSHQLRV
LKQARLVKYRKEGKVVYYSLDDDHIKQIFDQGYMHITENESGKQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 2e-25 49
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 2e-25 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clo1313_1984 YP_005688482.1 ArsR family transcriptional regulator BAC0366 Protein 3e-15 42