Gene Information

Name : join (Clo1313_1868)
Accession : YP_005688371.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Unknown
Product : transposase mutator type
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2183933 - 2185155 bp
Length : 1223 bp
Strand : -
Note : KEGG: ate:Athe_2013 transposase mutator type; manually curated; PFAM: transposase mutator type

DNA sequence :
ATGGCAAGAAAAAGGATAATAACACCAGAAAAGAAAGAGCTTATCAGAAATCTCATTTCTGAGTACAACATTACTTCAGC
AAAGGATTTGCAGGAAGCATTGAAGGATCTGCTCGGAGATACGATACAAAATATGTTGGAAGCAGAGCTGGATGAACATC
TCGGATATGAAAAGTACGAATCAACTGAAGAAGCGAAATCAAATTACCGTAACGGGTACACATCAAAAACATTAAAGTCA
AGTGTAGGGCAAGTGGAAATAGATATCCCGCGGGACCGGAATGCAGAATTCGAGCCGAAAATTGTTCCCAGGTATAAAAG
GGACATTTCAGAAATTGAAAATAAAATAATAGCAATGTATGCGCGGGGGATGTCTACCAGAGAAATCAACGAGCAGATAC
AGGAAATCTACGGATTTGAAGTATCTGCCGAGATGGTAAGTAAGATCACTGATAAAATACTACCTGAGATAGAAGAGTGG
CAGAAAAGGCCTCTGGGAGAGGTTTATCCGATAGTATTTATTGACGCAATTCATTTTTCAGTAAAAATGACGGCATTGTT
GGGAAGAAGGCCGTATATATTGTGCTGGCGATTGATATAGAAGGGCAGAAAGATGTTATCGGTATTTATGTAGGAGAAAA
TGAGAGCTCAAAATTCTGGCTGAGTGTCTTAAATGACCTTAAAAACAGGGGTGTTAAAGACATTCTGATTCTCTGTGCTG
ATGCACTTTCAGGGATAAAGGATGCAATCAATGCGGCTTTTCCGAATACTGAATATCAGAGGTGTATAGTACACCAGATA
AGAAACACGCTAAAGTATGTGTCAGATAAAGACCGAAAGGAATTTGCCAGGGACTTGAAACGGATATATACGGCTCCGAA
TGAGAAGGCAGGGTACGACCAGATGCTTGAGGTTTCAGAGAAATGGGAGAAGAAATACCCGGCAGCTATGAAGAGCTGGA
AGAGCAATTGGGATGTTATTTGTCCATTTTTTAAGTATTCGGAGGAACTACGTAAAATCATGTATACGACCAATACTATT
GAGAGCCTGAATAGCAGTTATAGAAGGATAAACAAATCAAGGACAGTATTTCCTGGCGACCAGTCACTTTTAAAGAGCAT
ATATTTAGCTACAGTGAAGATTACTTCAAAATGGACGATGCGTTACAAAAACTGGGGTTTGATACTGGGACAGCTACAGA
TTATGTTCGAAGGGCGTATATAG

Protein sequence :
MARKRIITPEKKELIRNLISEYNITSAKDLQEALKDLLGDTIQNMLEAELDEHLGYEKYESTEEAKSNYRNGYTSKTLKS
SVGQVEIDIPRDRNAEFEPKIVPRYKRDISEIENKIIAMYARGMSTREINEQIQEIYGFEVSAEMVSKITDKILPEIEEW
QKRPLGEVYPIVFIDAIHFSVKNDGIVGKKAVYIVLAIDIEGQKDVIGIYVGENESSKFWLSVLNDLKNRGVKDILILCA
DALSGIKDAINAAFPNTEYQRCIVHQIRNTLKYVSDKDRKEFARDLKRIYTAPNEKAGYDQMLEVSEKWEKKYPAAMKSW
KSNWDVICPFFKYSEELRKIMYTTNTIESLNSSYRRINKSRTVFPGDQSLLKSIYLATVKITSKWTMRYKNWGLILGQLQ
IMFEGRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 1e-98 54
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 2e-87 46