Gene Information

Name : Clo1313_1838 (Clo1313_1838)
Accession : YP_005688343.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2149473 - 2150186 bp
Length : 714 bp
Strand : -
Note : KEGG: dhd:Dhaf_3802 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAAAAACGCAATTATAAGATTGGAGAATATCAGTAAAATATACGGAAAAGACGATTATAAGACAGTTGCTTTAAAAGA
TATAAATTTAGAAATTTTCGAAGGGGATTTCGTGTCAATAATGGGGCCGTCAGGTTCCGGCAAAACAACGCTGCTGAATA
TAATCGGCTTCATAGATACGCCGACCGACGGTAAGTATTTTCTTAAAGGGCAGGATGTAAACAAAATGGCCAGGGGCAAG
TTTCACAAATTAAGAGGCACCGAAGTGAGTTTTATATTCCAGCAGTTTGCCCTTCTTAAAGACTATACGGCATATGAAAA
CATTCAGCTGCCGCTTTTATATAGAAAAATGTCAAGAAAAGAGAAAAAAGCAAAAATACTTTTTTATGCCGAAAAACTTG
GTATAGGTGATATTTTGCACAAAAAACCGTCTCAGTTATCAGGGGGGCAACAGCAAAGGGTGGCTATTGCCAGGGCACTG
GCAAGTGAAGCCAACATTATCCTTGCGGATGAACCTACCGGAGCATTGGATCAGAAAAAAGGAAACGAGCTTATGAAGAT
ACTTGCCGGTTTAAATAAAGAGGGGAAAACGATTTTGGTAGTAACTCACGATCCAAACATTGCAAATTATTGTATCAGAA
ACATTCGTATTGAAGACGGTAAGATAATAAGTGACAGTTCGAGTTTACAGGATGAACCGTTAAAAACTTGTTAG

Protein sequence : 
MKNAIIRLENISKIYGKDDYKTVALKDINLEIFEGDFVSIMGPSGSGKTTLLNIIGFIDTPTDGKYFLKGQDVNKMARGK
FHKLRGTEVSFIFQQFALLKDYTAYENIQLPLLYRKMSRKEKKAKILFYAEKLGIGDILHKKPSQLSGGQQQRVAIARAL
ASEANIILADEPTGALDQKKGNELMKILAGLNKEGKTILVVTHDPNIANYCIRNIRIEDGKIISDSSSLQDEPLKTC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-34 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clo1313_1838 YP_005688343.1 ABC transporter NC_012469.1.7686878. Protein 7e-53 52
Clo1313_1838 YP_005688343.1 ABC transporter NC_012469.1.7686946. Protein 1e-30 42
Clo1313_1838 YP_005688343.1 ABC transporter NC_008702.1.4606598. Protein 6e-37 42
Clo1313_1838 YP_005688343.1 ABC transporter CP001581.1.gene598.p Protein 7e-34 41