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Name : Clo1313_1739 (Clo1313_1739) Accession : YP_005688247.1 Strain : Clostridium thermocellum DSM 1313 Genome accession: NC_017304 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein FliP Function : - COG functional category : - COG ID : - EC number : - Position : 2033603 - 2034385 bp Length : 783 bp Strand : - Note : KEGG: cce:Ccel_2035 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein DNA sequence : ATGAAAACTAGGCTAAAATATCTTGGGATTATTTTATTAACAATAACAGTATTTATGTTAATAACGTCAAATGTTTATGC AGAGCCTGACTCAATAGCTTTGCCAAAACTAGGCTTTACGGTGGAACCTTCCGACAATCCCCAGGATGTTTCGACCACTA TTCAGATAATTGTGCTTTTAACGATTCTGTCATTGGCTCCATCTATATTAATTATGATGACAAGTTTTGTCAGAATAATC ATCGTGCTTTCCTTTTTCAGGAACGCGATTGGAACCCAACAAATGCCGCCGAATCAAGTTTTGATTGGGCTAGCTTTGTT TTTAACCCTGTTTATCATGAGGCCTGTATTAACGGAGATAAATGAAACTGCTTTTAAGCCTTACACAAATCAGGAAATTA CTCAGGAAGTTGCTTTGGAAAGGTCTTCGGATATTATCAAAAGGTTCATGCTAAAGCAAACATCCAAAAATGATCTCGGT CTTTTCGTATCGCTTTCCGGCATGGAAACACCCATAAAAGAAGAAGACATTCCAAAACTTCCGTTAACCATAGTTATTCC GGCGTTTATAATAAGTGAGCTGACAATAGCTTTTAAAATAGGTTTTTTAATATATATACCGTTTCTGGTAATTGACATGG TGGTTTCAAGTACTCTTATGTCCATGGGTATGATGATGCTTCCTCCTGTAATGATATCTCTTCCTTTCAAGATATTGCTG TTCATCATGGTGGGAGGATGGAATCTTATGACGCAGATGATAGTAAACAGTTTTGTTACATAG Protein sequence : MKTRLKYLGIILLTITVFMLITSNVYAEPDSIALPKLGFTVEPSDNPQDVSTTIQIIVLLTILSLAPSILIMMTSFVRII IVLSFFRNAIGTQQMPPNQVLIGLALFLTLFIMRPVLTEINETAFKPYTNQEITQEVALERSSDIIKRFMLKQTSKNDLG LFVSLSGMETPIKEEDIPKLPLTIVIPAFIISELTIAFKIGFLIYIPFLVIDMVVSSTLMSMGMMMLPPVMISLPFKILL FIMVGGWNLMTQMIVNSFVT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 2e-23 | 43 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 2e-23 | 43 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 2e-23 | 43 |
| escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 3e-23 | 43 |
| escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 3e-23 | 43 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 2e-24 | 43 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 2e-24 | 43 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 3e-24 | 43 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 2e-24 | 43 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 3e-24 | 43 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 2e-24 | 43 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 3e-24 | 43 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 2e-24 | 43 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 3e-24 | 43 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 2e-24 | 43 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 1e-22 | 42 |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 1e-22 | 42 |
| escR | AAC38369.1 | EscR | Virulence | LEE | Protein | 1e-23 | 42 |
| hrcR | NP_791222.3 | type III secretion protein HrcR | Virulence | Hrp PAI | Protein | 1e-16 | 41 |
| hrcR | AAG33884.1 | HrcR | Virulence | Hrp PAI | Protein | 1e-16 | 41 |
| unnamed | AAL06354.1 | EscR | Virulence | LEE | Protein | 9e-25 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clo1313_1739 | YP_005688247.1 | flagellar biosynthetic protein FliP | VFG2016 | Protein | 6e-38 | 55 |
| Clo1313_1739 | YP_005688247.1 | flagellar biosynthetic protein FliP | VFG1259 | Protein | 3e-39 | 55 |
| Clo1313_1739 | YP_005688247.1 | flagellar biosynthetic protein FliP | VFG2494 | Protein | 1e-41 | 53 |
| Clo1313_1739 | YP_005688247.1 | flagellar biosynthetic protein FliP | VFG2338 | Protein | 2e-40 | 50 |
| Clo1313_1739 | YP_005688247.1 | flagellar biosynthetic protein FliP | VFG0519 | Protein | 1e-23 | 43 |
| Clo1313_1739 | YP_005688247.1 | flagellar biosynthetic protein FliP | VFG0827 | Protein | 1e-24 | 43 |
| Clo1313_1739 | YP_005688247.1 | flagellar biosynthetic protein FliP | VFG0715 | Protein | 8e-24 | 42 |
| Clo1313_1739 | YP_005688247.1 | flagellar biosynthetic protein FliP | VFG0044 | Protein | 3e-23 | 41 |
