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Name : Clo1313_1703 (Clo1313_1703) Accession : YP_005688211.1 Strain : Clostridium thermocellum DSM 1313 Genome accession: NC_017304 Putative virulence/resistance : Virulence Product : bacteriocin ABC transporter Function : - COG functional category : - COG ID : - EC number : - Position : 1996370 - 1998553 bp Length : 2184 bp Strand : - Note : TIGRFAM: ABC-type bacteriocin transporter; PFAM: ABC transporter transmembrane region; peptidase C39 bacteriocin processing; ABC transporter related; KEGG: amt:Amet_1032 ABC-type bacteriocin transporter; SMART: AAA ATPase DNA sequence : ATGCTCAGGCGTTTGTTCAAAAAAAAGTATGTATGCGTAAGGCAATATGATTTGACAGACTGTGGAGCAGCCTGTTTGTC CAGTATTGCCCAATATTACGGGTTAAAAATGTCCCTTGCAAAGATACGTGAGATGACAGGCACCGATACCCAGGGCACAA ATGCCTATGGTTTAATTCATGCTGCAAAGCAACTGGGGTTTTCAGCAAAAGGTGTTAAGGCCTCAAAAGAGGATTTGCTG AAAGATTTTAGGCTTCCAGCCATAGCAAATGTAATTGTTGACAACAGGCTTGCTCATTTTGTAGTGATTTATTCAATTAA AAACAGGATAATTACGGTTGCCGACCCTGGCAAGGGAATTGTCAGGTATAGTATGGATGATTTTTGTTCAATTTGGACCG GTGGGCTTGTTTTGCTGGAGCCCGGCGAAGCTTTCCAAAAAGGGGATTATACCCAAAATATGATGGTGAAATTTGCAGGT TTTTTGAAGCCTTTAAAAAAAACCGTACTGTGTATATTTTTAGCTTCGCTTTTATATACTGCTTTAGGAATTGCAGGCTC CTTTTATATCAAGTTTTTGTTTGACGACCTTATAAAATTTGAAAAGCTTAACGACCTTCATATAATTTCCGCAGGATTTG CTGTTATATTTTTACTTCAGATATTTCTTAATTATTACAGAAGCATACTTGTTACCAAACTTGGAATGAGCATTGACAAG TCCATAATGATGGAGTATTACTCCCATGTGTTAAAGCTTCCCATGAATTTTTTCAATTCCAGAAAAGTTGGGGAGATAAT TTCAAGATTTATGGATGCTTCAAAAATACGACAGGCAATTTCCGGAGCAACCCTTACCATAATGATTGATACAATTATGG CCGTTATCGGAGGAATTCTTTTATATATACAAAACTCTTCCCTGTTCTTTATATCTTTTATCATCATATTGCTGTACGGA ATAATTGTGACGGTGTTTAACAAACCGATTCAGAATGCTAACAGGCAAATAATGGAGGATAATGCAAAATTAACTTCGGC GCTGGTGGAGTCGGTTAAAGGGATTGAGACGATAAAATCCTTTGGTGCCGAGGAACAGACCGAAAAAAGCACCAGAGACA AAATTGAAACTGTAATGAAAAGCTCTTTTAAAGAAGGGATGCTGTACATAAATCTTTCTTCCCTGACCGGTATTGTTGCC GGGCTTGGAGGTATTGTAATACTCTGGGCCGGTGCATACAATGTCATAAAGGGAAACATGAGCGGGGGACAGCTTCTTGC TTTTAATGCACTGTTGGCATATTTTCTCACACCTGTGAAAAACTTAATTGATCTTCAGCCGCTTATACAAACGGCGGTGG TAGCCTCCAACAGGCTTGGAGAGATACTTGAACTTGCCACTGAAAAGGAACTGAGAGAAGACAGTGATGATTTTGTCATA TCATTAAAAGGAGACATTGAATTTAGGAATGTGGATTTTCGCTACGGATTAAGAAAGCCTGTGCTAAAAAACATTAATTT AACCATACCAAAAGGGAAAACGGTAGCCATAGTAGGTGAGAGTGGTTCCGGGAAAACTACTCTGGCAAAGCTTTTGATGA ATTTTTACAGTCCGGAAAAAGGGGACATTTTGATAAACGGACACAGTATAAAAAATATAAGTTTGGAGTTGATTAGAAAG AAAATAGCTTTTGTTTCACAGGATGTCTTTATTTTCAGTGGTACTGTAAAAGAAAATCTTTGTCTTGGCAATGAAAATGT TGATATGGATGAGATTATAAAAGCGGCTAAAATGGCAAATGCCCATGATTTTATAGAAAAACTGCCCCTAAAATATGATA CTTTTTTGAATGAAAGCGGAGCAAATCTTTCCGAAGGGCAAAAACAAAGGCTGGCGATAGCAAGGGCACTGCTTAAAAAA CCGGATATTTTGATACTCGACGAGGCAACAAGCAATTTGGACAGCATCACCGAAAACCATATCAAGGATGCAATATACGG TTTGGAAGATGGTGTAACGGTTATTATAATAGCCCACAGGCTGAGCACAATAGTAAACTGTGACAAAATATATCTGCTAA AAGACGGTGAGATAGTGGAGAGTGGCTCTCACACCGAGCTTATAGCGTTAAAAGGTTGTTATTTTAAGATGTGGAAACAG ACAGAAAACACTTTGGCTTCGTAA Protein sequence : MLRRLFKKKYVCVRQYDLTDCGAACLSSIAQYYGLKMSLAKIREMTGTDTQGTNAYGLIHAAKQLGFSAKGVKASKEDLL KDFRLPAIANVIVDNRLAHFVVIYSIKNRIITVADPGKGIVRYSMDDFCSIWTGGLVLLEPGEAFQKGDYTQNMMVKFAG FLKPLKKTVLCIFLASLLYTALGIAGSFYIKFLFDDLIKFEKLNDLHIISAGFAVIFLLQIFLNYYRSILVTKLGMSIDK SIMMEYYSHVLKLPMNFFNSRKVGEIISRFMDASKIRQAISGATLTIMIDTIMAVIGGILLYIQNSSLFFISFIIILLYG IIVTVFNKPIQNANRQIMEDNAKLTSALVESVKGIETIKSFGAEEQTEKSTRDKIETVMKSSFKEGMLYINLSSLTGIVA GLGGIVILWAGAYNVIKGNMSGGQLLAFNALLAYFLTPVKNLIDLQPLIQTAVVASNRLGEILELATEKELREDSDDFVI SLKGDIEFRNVDFRYGLRKPVLKNINLTIPKGKTVAIVGESGSGKTTLAKLLMNFYSPEKGDILINGHSIKNISLELIRK KIAFVSQDVFIFSGTVKENLCLGNENVDMDEIIKAAKMANAHDFIEKLPLKYDTFLNESGANLSEGQKQRLAIARALLKK PDILILDEATSNLDSITENHIKDAIYGLEDGVTVIIIAHRLSTIVNCDKIYLLKDGEIVESGSHTELIALKGCYFKMWKQ TENTLAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_1082 | YP_698404.1 | bacteriocin ABC transporter ATP-binding/permease | Virulence | Not named | Protein | 1e-168 | 54 |
| CPR_0658 | YP_697985.1 | lactococcin g processing and transport ATP-binding protein | Virulence | Not named | Protein | 9e-120 | 42 |
