Gene Information

Name : Clo1313_1698 (Clo1313_1698)
Accession : YP_005688206.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1991452 - 1992135 bp
Length : 684 bp
Strand : -
Note : KEGG: cpy:Cphy_2078 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGGAGATATTGAGGGTTGAAAACGTGACAAAAACGTACGGCACCGGAGAGAACATGGTCAGGGCATTGGACGGTGTTTC
ATTTTCGGTAAAAAAGGGTGAATTCATTGCAATTGTAGGGCCATCGGGTTCGGGCAAATCCACACTTTTGCATATTTTAG
GCGGAGTGGACAAACCTACAAGCGGCAAGGTTTTTATGGACGGCAAGGATGTTTATGCTCAAAATGACGAGCAGCTTGCA
ATTTTTCGCCGCCGGCAGGTGGGGCTCATATATCAGTTTTACAACCTTATACCCGTGTTAAATGTAGTGGAGAATATTAC
ACTTCCGGTACTTATGGACGGAAGAAAAGTGAACAAAGAACGACTGGAAGAGTTGATTGAGACTTTGAATCTTAAAGGAA
GGGAAAATCATTTGCCCAATCAGCTGTCGGGAGGCCAGCAGCAAAGGGTGTCCATTGGCAGGGCATTGATAAATGCTCCT
TCGGTGGTGCTTGCGGACGAACCCACGGGAAACCTGGATTCGAAAAACAGCCAGGAAATTGTGGAACTTTTGAAACTCTC
CAATAAAAAATACAATCAAACCTTGATTGTTATTACCCATGACGAAAATATTGCGTTGCAGGCAAACCGAGTAATTGCCA
TTGAGGACGGGAGGATCATTCGTGACGAGGTGATTCGGCAATGA

Protein sequence : 
MEILRVENVTKTYGTGENMVRALDGVSFSVKKGEFIAIVGPSGSGKSTLLHILGGVDKPTSGKVFMDGKDVYAQNDEQLA
IFRRRQVGLIYQFYNLIPVLNVVENITLPVLMDGRKVNKERLEELIETLNLKGRENHLPNQLSGGQQQRVSIGRALINAP
SVVLADEPTGNLDSKNSQEIVELLKLSNKKYNQTLIVITHDENIALQANRVIAIEDGRIIRDEVIRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-37 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-38 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-38 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-38 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clo1313_1698 YP_005688206.1 ABC transporter CP001581.1.gene798.p Protein 1e-63 60
Clo1313_1698 YP_005688206.1 ABC transporter CP001581.1.gene598.p Protein 3e-59 54
Clo1313_1698 YP_005688206.1 ABC transporter NC_012469.1.7686878. Protein 2e-41 43