Gene Information

Name : Clo1313_0110 (Clo1313_0110)
Accession : YP_005686658.1
Strain : Clostridium thermocellum DSM 1313
Genome accession: NC_017304
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 124123 - 125001 bp
Length : 879 bp
Strand : +
Note : KEGG: aoe:Clos_1327 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase

DNA sequence :
ATGAAAATCAGAGTGGGCAGCCGTGAAAGCAAACTTGCTGTGAGGCAAGCGCAGATAGTGATAGATTCTATAAAAAAATA
CAACCCCGATATCGAGATCGAGCTTGTGACAATGAAAACAACAGGGGATAAAATTCTTGACAAAACCATTGACAAGATTG
GCGGGAAAGGTCTGTTTGTAAAGGAACTTGATCGTGCCTTGCTGGACGGAAAGGTGGATATCACCGTTCACAGCTTTAAG
GACATGCCCATGGATATAGATGACCGTCTACCCATTGTTGCGGTTTCAAAAAGGGAAGACCCCAGGGATGTGCTTGTATT
GCCCAAAGGGAAAAATGAAATTGATTTTAACGGTCCCATCGGCTGTTCAAGTTCAAGAAGAAAAATTCAGATAGAGAAAA
TCTATCCCGGCTGCACAGTCGAGCCGATAAGGGGAAATGTTTTAACCCGCCTTGAAAAGCTGGACAAGGGAGAATATTCA
GCCATAGCCCTGGCATATGCCGGCCTTAAGAGACTGGGACTTGAAGAGAGAATATGGCGTGTGTTCAGTACGGATGAAAT
TGTTCCGGCGGCATGTCAGGGAATTATAGCTGTACAAGCACGAAAAGATTTTGACGCATCGATTTTGGCAAATTTCCATG
ACAAAGACTCGTGGGATGTGTCGGTGGCGGAGAGAAGCTTTATAAAGGCATTGAACGGCGGATGCAGCTCTCCGTCCGCA
GCTTATGGAGTGATACAGGGCGAAAAAATAGTTCTCACGGGATTTTATGTTGATAAAAACGGCAAAATTTATAAAATGAC
CAAAACGGGAGACAGAAATCAGGGAGAAGCGTTGGGATACAGTTTGGCGATGGAAATGCTGAAGGGAGCGGATGCATAA

Protein sequence :
MKIRVGSRESKLAVRQAQIVIDSIKKYNPDIEIELVTMKTTGDKILDKTIDKIGGKGLFVKELDRALLDGKVDITVHSFK
DMPMDIDDRLPIVAVSKREDPRDVLVLPKGKNEIDFNGPIGCSSSRRKIQIEKIYPGCTVEPIRGNVLTRLEKLDKGEYS
AIALAYAGLKRLGLEERIWRVFSTDEIVPAACQGIIAVQARKDFDASILANFHDKDSWDVSVAERSFIKALNGGCSSPSA
AYGVIQGEKIVLTGFYVDKNGKIYKMTKTGDRNQGEALGYSLAMEMLKGADA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 8e-43 42
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 8e-43 42