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Name : Clo1313_0011 (Clo1313_0011) Accession : YP_005686562.1 Strain : Clostridium thermocellum DSM 1313 Genome accession: NC_017304 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 11323 - 12594 bp Length : 1272 bp Strand : + Note : TIGRFAM: seryl-tRNA synthetase; KEGG: tit:Thit_0028 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGCTTGACATTAAATTGATTAGAAGTAATCCCGAAATATTAAAAAAAGCTCTTCAAAAAAGAAAAGACAATTTTGATGT GAACGGGCTTTTAAGCCTTGATGAGAAAAGAAGAAAAACTCTCGTGGAACTGGAACAACTAAGAAACAAACAGAATGAGA ATTCAAAGCTTATTCCCAAATACAAAAAAGAAGGAAAAGATGTATCATCTCTGATGGAGGAAATGAAAAGTCTTTCGGAA AAAATAAAAGCTCTCGATGCGGAAGTCAGAAAGATTGACGAGGAATTGAACGCAATTCTTCTGACCATACCCAATATACC ACATGAAAGTGTTCCGATGGGAGACAGTGACGAGGACAACGTTGAGGTAAGAAGATGGGGTGAACCCAGAAAATTTGATT TTACTCCAAAGCCGCACTGGGAGATAGGAGAAAATCTCGACATACTCGACTTTTCCAAAGCTGCAAAAGTGACAGGGGCA AGATTTACATTTTACAAGGGACTTGGGGCAAGACTTGAAAGAGCTCTAATGAACTTCATGCTGGATCTGCATGTCGATAA ACATGGGTATGTGGAAGTATTTCCACCGTTTTTGGTACATAGAAACAGTATGATTGGAACGGGCCAACTGCCCAAATTTG AAGAAGATGCATTTAAAGTAAGTGATACCGATTATTTCCTGATACCGACTGCCGAAGTGCCAGTAACCAACATGTACAGG GAACAAATACTTGACGTGAAAGACCTTCCCATAAAGCATGTTGCATATTCGGCATGCTTCAGAGCGGAGGCAGGTGCTGC AGGAAGGGATACAAGAGGTCTTATAAGACAGCATCAATTTAACAAAGTTGAGCTTGTAAAATTCACAACACCTGAGACAT CCTATGAAGAACTGGAAAAGCTCACAAGAGATGCTGAGGAAGTATTGCAGATGTTGGAAATTCCATACAGAGTGGTGAAG ATATGTGTGGGAGACCTTGGATTCACGGCGGCAATGAAATATGACATAGAAGTATGGATGCCCAGCTACAACAGATATGT GGAAATATCCTCATGCAGTAACTTTGAGGACTTCCAGGCAAGAAGAGCAGGAATAAAGTTCAGGAGAGGACTAAATGAAA AACCGGAGTTTGTTCATACTTTGAATGGCTCAGGAGTTGCAATGGGAAGAGCAACCGCCTGCATACTTGAAAACTATCAG CAGGAAGACGGATCGGTCGTTGTGCCCAAGGTCCTCAGGGAGTATTTAGGAGGCATCAGTGTAATTAAATAG Protein sequence : MLDIKLIRSNPEILKKALQKRKDNFDVNGLLSLDEKRRKTLVELEQLRNKQNENSKLIPKYKKEGKDVSSLMEEMKSLSE KIKALDAEVRKIDEELNAILLTIPNIPHESVPMGDSDEDNVEVRRWGEPRKFDFTPKPHWEIGENLDILDFSKAAKVTGA RFTFYKGLGARLERALMNFMLDLHVDKHGYVEVFPPFLVHRNSMIGTGQLPKFEEDAFKVSDTDYFLIPTAEVPVTNMYR EQILDVKDLPIKHVAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTTPETSYEELEKLTRDAEEVLQMLEIPYRVVK ICVGDLGFTAAMKYDIEVWMPSYNRYVEISSCSNFEDFQARRAGIKFRRGLNEKPEFVHTLNGSGVAMGRATACILENYQ QEDGSVVVPKVLREYLGGISVIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-115 | 58 |
